Protein–RNA interactions for Protein: P14097

Ccl4, C-C motif chemokine 4, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl4P14097 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.43■□□□□ 0.7
Ccl4P14097 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl4P14097 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.43■□□□□ 0.7
Ccl4P14097 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.43■□□□□ 0.7
Ccl4P14097 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl4P14097 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl4P14097 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Ccl4P14097 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.43■□□□□ 0.7
Ccl4P14097 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl4P14097 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.43■□□□□ 0.7
Ccl4P14097 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ccl4P14097 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
Ccl4P14097 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl4P14097 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ccl4P14097 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl4P14097 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Ccl4P14097 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl4P14097 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl4P14097 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.42■□□□□ 0.7
Ccl4P14097 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl4P14097 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl4P14097 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Ccl4P14097 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.42■□□□□ 0.7
Ccl4P14097 Gm44549-201ENSMUST00000208351 577 ntBASIC19.42■□□□□ 0.7
Ccl4P14097 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl4P14097 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.42■□□□□ 0.7
Ccl4P14097 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl4P14097 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl4P14097 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl4P14097 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl4P14097 Gm2399-201ENSMUST00000104944 225 ntBASIC19.41■□□□□ 0.7
Ccl4P14097 Gm11643-201ENSMUST00000119578 864 ntBASIC19.41■□□□□ 0.7
Ccl4P14097 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.41■□□□□ 0.7
Ccl4P14097 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ccl4P14097 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl4P14097 Gm9987-201ENSMUST00000069768 567 ntBASIC19.41■□□□□ 0.7
Ccl4P14097 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl4P14097 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl4P14097 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccl4P14097 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl4P14097 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl4P14097 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccl4P14097 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccl4P14097 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
Ccl4P14097 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccl4P14097 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccl4P14097 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccl4P14097 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ccl4P14097 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccl4P14097 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ccl4P14097 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccl4P14097 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.4■□□□□ 0.7
Ccl4P14097 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.4■□□□□ 0.7
Ccl4P14097 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccl4P14097 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Ccl4P14097 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Ccl4P14097 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccl4P14097 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccl4P14097 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
Ccl4P14097 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Ccl4P14097 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccl4P14097 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccl4P14097 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccl4P14097 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl4P14097 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl4P14097 Mir1199-201ENSMUST00000117015 119 ntBASIC19.39■□□□□ 0.69
Ccl4P14097 Gm15378-201ENSMUST00000121894 207 ntBASIC19.39■□□□□ 0.69
Ccl4P14097 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl4P14097 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl4P14097 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl4P14097 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl4P14097 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl4P14097 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl4P14097 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl4P14097 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl4P14097 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccl4P14097 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccl4P14097 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ccl4P14097 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccl4P14097 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccl4P14097 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccl4P14097 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ccl4P14097 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl4P14097 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl4P14097 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl4P14097 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl4P14097 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl4P14097 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.37■□□□□ 0.69
Ccl4P14097 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl4P14097 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.37■□□□□ 0.69
Ccl4P14097 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.37■□□□□ 0.69
Ccl4P14097 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl4P14097 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl4P14097 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl4P14097 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl4P14097 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl4P14097 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl4P14097 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccl4P14097 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ccl4P14097 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms