Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cd74P04441 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Cd74P04441 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cd74P04441 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.98■□□□□ 0.15
Cd74P04441 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cd74P04441 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.98■□□□□ 0.15
Cd74P04441 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cd74P04441 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cd74P04441 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cd74P04441 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Cd74P04441 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cd74P04441 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cd74P04441 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cd74P04441 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.97■□□□□ 0.15
Cd74P04441 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cd74P04441 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cd74P04441 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cd74P04441 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cd74P04441 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cd74P04441 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.97■□□□□ 0.15
Cd74P04441 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.97■□□□□ 0.15
Cd74P04441 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Cd74P04441 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cd74P04441 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cd74P04441 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cd74P04441 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cd74P04441 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Cd74P04441 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cd74P04441 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cd74P04441 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cd74P04441 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cd74P04441 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cd74P04441 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Cd74P04441 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cd74P04441 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cd74P04441 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Cd74P04441 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.96■□□□□ 0.15
Cd74P04441 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cd74P04441 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.96■□□□□ 0.15
Cd74P04441 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cd74P04441 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cd74P04441 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cd74P04441 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cd74P04441 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cd74P04441 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cd74P04441 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cd74P04441 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cd74P04441 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cd74P04441 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cd74P04441 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cd74P04441 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cd74P04441 Grk6-206ENSMUST00000224995 2971 ntBASIC15.96■□□□□ 0.14
Cd74P04441 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cd74P04441 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cd74P04441 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC15.95■□□□□ 0.14
Cd74P04441 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cd74P04441 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cd74P04441 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cd74P04441 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cd74P04441 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.95■□□□□ 0.14
Cd74P04441 Smad6-203ENSMUST00000179458 273 ntBASIC15.95■□□□□ 0.14
Cd74P04441 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Cd74P04441 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cd74P04441 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cd74P04441 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.95■□□□□ 0.14
Cd74P04441 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Cd74P04441 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cd74P04441 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cd74P04441 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cd74P04441 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cd74P04441 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cd74P04441 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cd74P04441 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cd74P04441 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cd74P04441 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cd74P04441 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
Cd74P04441 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.94■□□□□ 0.14
Cd74P04441 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.94■□□□□ 0.14
Cd74P04441 Gm10493-201ENSMUST00000097270 612 ntBASIC15.94■□□□□ 0.14
Cd74P04441 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cd74P04441 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cd74P04441 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.94■□□□□ 0.14
Cd74P04441 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cd74P04441 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.94■□□□□ 0.14
Cd74P04441 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cd74P04441 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cd74P04441 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cd74P04441 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cd74P04441 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cd74P04441 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC15.93■□□□□ 0.14
Cd74P04441 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.93■□□□□ 0.14
Cd74P04441 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.93■□□□□ 0.14
Cd74P04441 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cd74P04441 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cd74P04441 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cd74P04441 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cd74P04441 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cd74P04441 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cd74P04441 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cd74P04441 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms