Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
TcraP01849 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TcraP01849 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TcraP01849 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TcraP01849 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC13.94□□□□□ -0.18
TcraP01849 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TcraP01849 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TcraP01849 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC13.94□□□□□ -0.18
TcraP01849 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC13.94□□□□□ -0.18
TcraP01849 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TcraP01849 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TcraP01849 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
TcraP01849 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TcraP01849 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TcraP01849 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TcraP01849 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TcraP01849 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC13.93□□□□□ -0.18
TcraP01849 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC13.93□□□□□ -0.18
TcraP01849 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TcraP01849 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TcraP01849 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TcraP01849 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TcraP01849 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TcraP01849 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TcraP01849 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TcraP01849 Grk6-206ENSMUST00000224995 2971 ntBASIC13.93□□□□□ -0.18
TcraP01849 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
TcraP01849 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TcraP01849 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TcraP01849 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TcraP01849 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TcraP01849 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TcraP01849 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
TcraP01849 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TcraP01849 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC13.92□□□□□ -0.18
TcraP01849 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TcraP01849 Gm45444-201ENSMUST00000211394 898 ntBASIC13.92□□□□□ -0.18
TcraP01849 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TcraP01849 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TcraP01849 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TcraP01849 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TcraP01849 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TcraP01849 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TcraP01849 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TcraP01849 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TcraP01849 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TcraP01849 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TcraP01849 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TcraP01849 AC166356.1-201ENSMUST00000228236 1426 ntBASIC13.91□□□□□ -0.18
TcraP01849 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TcraP01849 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TcraP01849 Gm5953-201ENSMUST00000220644 2616 ntBASIC13.91□□□□□ -0.18
TcraP01849 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TcraP01849 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TcraP01849 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC13.91□□□□□ -0.18
TcraP01849 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
TcraP01849 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TcraP01849 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TcraP01849 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TcraP01849 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TcraP01849 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TcraP01849 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TcraP01849 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TcraP01849 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TcraP01849 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TcraP01849 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
TcraP01849 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC13.9□□□□□ -0.18
TcraP01849 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TcraP01849 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TcraP01849 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TcraP01849 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TcraP01849 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TcraP01849 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TcraP01849 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TcraP01849 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TcraP01849 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TcraP01849 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TcraP01849 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
TcraP01849 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TcraP01849 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TcraP01849 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
TcraP01849 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TcraP01849 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TcraP01849 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TcraP01849 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TcraP01849 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TcraP01849 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TcraP01849 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC13.89□□□□□ -0.19
TcraP01849 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC13.89□□□□□ -0.19
TcraP01849 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TcraP01849 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TcraP01849 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC13.89□□□□□ -0.19
TcraP01849 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC13.89□□□□□ -0.19
TcraP01849 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC13.89□□□□□ -0.19
TcraP01849 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC13.89□□□□□ -0.19
TcraP01849 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TcraP01849 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TcraP01849 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TcraP01849 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TcraP01849 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms