Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
Syn1O88935 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Syn1O88935 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syn1O88935 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Syn1O88935 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syn1O88935 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syn1O88935 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syn1O88935 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syn1O88935 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Syn1O88935 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Syn1O88935 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.76■□□□□ 0.75
Syn1O88935 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Syn1O88935 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syn1O88935 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.76■□□□□ 0.75
Syn1O88935 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Syn1O88935 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.75■□□□□ 0.75
Syn1O88935 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Syn1O88935 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Syn1O88935 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syn1O88935 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syn1O88935 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syn1O88935 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syn1O88935 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syn1O88935 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syn1O88935 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syn1O88935 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Syn1O88935 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.74■□□□□ 0.75
Syn1O88935 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.74■□□□□ 0.75
Syn1O88935 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.74■□□□□ 0.75
Syn1O88935 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Syn1O88935 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.74■□□□□ 0.75
Syn1O88935 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.74■□□□□ 0.75
Syn1O88935 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syn1O88935 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Syn1O88935 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.74■□□□□ 0.75
Syn1O88935 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Syn1O88935 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Syn1O88935 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syn1O88935 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syn1O88935 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.73■□□□□ 0.75
Syn1O88935 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syn1O88935 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.73■□□□□ 0.75
Syn1O88935 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syn1O88935 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syn1O88935 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syn1O88935 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Syn1O88935 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Syn1O88935 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.73■□□□□ 0.75
Syn1O88935 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.73■□□□□ 0.75
Syn1O88935 Gm10698-201ENSMUST00000182663 604 ntBASIC19.73■□□□□ 0.75
Syn1O88935 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.73■□□□□ 0.75
Syn1O88935 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syn1O88935 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Syn1O88935 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Syn1O88935 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Syn1O88935 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.72■□□□□ 0.75
Syn1O88935 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Syn1O88935 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Syn1O88935 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Syn1O88935 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Syn1O88935 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Syn1O88935 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.72■□□□□ 0.75
Syn1O88935 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Syn1O88935 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Syn1O88935 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Syn1O88935 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Syn1O88935 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
Syn1O88935 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Syn1O88935 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.71■□□□□ 0.75
Syn1O88935 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Syn1O88935 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Syn1O88935 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.71■□□□□ 0.75
Syn1O88935 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Syn1O88935 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.7■□□□□ 0.74
Syn1O88935 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Syn1O88935 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Syn1O88935 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.7■□□□□ 0.74
Syn1O88935 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Syn1O88935 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Syn1O88935 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Syn1O88935 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Syn1O88935 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Syn1O88935 Gm18666-201ENSMUST00000190039 958 ntBASIC19.7■□□□□ 0.74
Syn1O88935 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.7■□□□□ 0.74
Syn1O88935 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Syn1O88935 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Syn1O88935 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Syn1O88935 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Syn1O88935 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Syn1O88935 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.69■□□□□ 0.74
Syn1O88935 Dio3-201ENSMUST00000097228 1449 ntBASIC19.69■□□□□ 0.74
Syn1O88935 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Syn1O88935 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
Syn1O88935 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Syn1O88935 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Syn1O88935 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Syn1O88935 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.69■□□□□ 0.74
Syn1O88935 Gm10231-201ENSMUST00000181584 441 ntBASIC19.69■□□□□ 0.74
Syn1O88935 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Syn1O88935 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms