Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ClppO88696 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.55■□□□□ 0.56
ClppO88696 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ClppO88696 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ClppO88696 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ClppO88696 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ClppO88696 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ClppO88696 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.55■□□□□ 0.56
ClppO88696 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ClppO88696 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ClppO88696 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
ClppO88696 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
ClppO88696 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ClppO88696 Gm13234-201ENSMUST00000120010 747 ntBASIC18.54■□□□□ 0.56
ClppO88696 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.54■□□□□ 0.56
ClppO88696 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.54■□□□□ 0.56
ClppO88696 Gm9988-201ENSMUST00000069786 435 ntBASIC18.54■□□□□ 0.56
ClppO88696 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ClppO88696 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ClppO88696 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ClppO88696 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ClppO88696 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
ClppO88696 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ClppO88696 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ClppO88696 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ClppO88696 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.53■□□□□ 0.56
ClppO88696 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.53■□□□□ 0.56
ClppO88696 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ClppO88696 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.53■□□□□ 0.56
ClppO88696 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ClppO88696 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
ClppO88696 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.53■□□□□ 0.56
ClppO88696 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ClppO88696 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ClppO88696 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ClppO88696 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ClppO88696 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ClppO88696 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ClppO88696 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ClppO88696 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
ClppO88696 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.52■□□□□ 0.56
ClppO88696 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ClppO88696 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ClppO88696 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ClppO88696 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ClppO88696 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ClppO88696 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ClppO88696 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.52■□□□□ 0.56
ClppO88696 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ClppO88696 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
ClppO88696 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.52■□□□□ 0.56
ClppO88696 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ClppO88696 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ClppO88696 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ClppO88696 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ClppO88696 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ClppO88696 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ClppO88696 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ClppO88696 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
ClppO88696 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ClppO88696 Gm12933-201ENSMUST00000120203 872 ntBASIC18.51■□□□□ 0.55
ClppO88696 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.51■□□□□ 0.55
ClppO88696 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.51■□□□□ 0.55
ClppO88696 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.51■□□□□ 0.55
ClppO88696 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ClppO88696 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
ClppO88696 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.51■□□□□ 0.55
ClppO88696 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ClppO88696 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ClppO88696 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ClppO88696 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ClppO88696 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ClppO88696 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ClppO88696 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ClppO88696 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.5■□□□□ 0.55
ClppO88696 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ClppO88696 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ClppO88696 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ClppO88696 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ClppO88696 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ClppO88696 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ClppO88696 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ClppO88696 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ClppO88696 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ClppO88696 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ClppO88696 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ClppO88696 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
ClppO88696 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ClppO88696 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.49■□□□□ 0.55
ClppO88696 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ClppO88696 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.49■□□□□ 0.55
ClppO88696 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ClppO88696 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ClppO88696 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ClppO88696 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ClppO88696 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.48■□□□□ 0.55
ClppO88696 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ClppO88696 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ClppO88696 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ClppO88696 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms