Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Becn1O88597 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Becn1O88597 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Becn1O88597 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Becn1O88597 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Becn1O88597 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Becn1O88597 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC21.81■■□□□ 1.08
Becn1O88597 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Becn1O88597 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Becn1O88597 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Becn1O88597 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Becn1O88597 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Becn1O88597 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Becn1O88597 AC122335.2-201ENSMUST00000213901 6181 ntBASIC21.81■■□□□ 1.08
Becn1O88597 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Becn1O88597 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Becn1O88597 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Becn1O88597 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Becn1O88597 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Becn1O88597 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Becn1O88597 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Becn1O88597 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Becn1O88597 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Becn1O88597 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Becn1O88597 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Becn1O88597 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Becn1O88597 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Becn1O88597 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.8■■□□□ 1.08
Becn1O88597 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Becn1O88597 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Becn1O88597 BC021767-201ENSMUST00000126387 1716 ntBASIC21.8■■□□□ 1.08
Becn1O88597 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Becn1O88597 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
Becn1O88597 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Becn1O88597 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Becn1O88597 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Becn1O88597 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Becn1O88597 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Becn1O88597 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Becn1O88597 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Becn1O88597 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.79■■□□□ 1.08
Becn1O88597 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Becn1O88597 Rps24-207ENSMUST00000224568 714 ntBASIC21.79■■□□□ 1.08
Becn1O88597 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Becn1O88597 Gm9959-201ENSMUST00000068277 390 ntBASIC21.79■■□□□ 1.08
Becn1O88597 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Becn1O88597 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Becn1O88597 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Becn1O88597 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
Becn1O88597 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Becn1O88597 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Becn1O88597 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Becn1O88597 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.78■■□□□ 1.08
Becn1O88597 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Becn1O88597 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Becn1O88597 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Becn1O88597 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Becn1O88597 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Becn1O88597 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Becn1O88597 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Becn1O88597 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Becn1O88597 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Becn1O88597 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Becn1O88597 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Becn1O88597 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Becn1O88597 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Becn1O88597 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Becn1O88597 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.77■■□□□ 1.08
Becn1O88597 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Becn1O88597 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Becn1O88597 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Becn1O88597 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Becn1O88597 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
Becn1O88597 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Becn1O88597 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Becn1O88597 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Becn1O88597 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
Becn1O88597 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Becn1O88597 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Becn1O88597 Gm45102-201ENSMUST00000207427 857 ntBASIC21.76■■□□□ 1.07
Becn1O88597 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.76■■□□□ 1.07
Becn1O88597 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
Becn1O88597 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Becn1O88597 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Becn1O88597 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Becn1O88597 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Becn1O88597 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Becn1O88597 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Becn1O88597 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Becn1O88597 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Becn1O88597 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Becn1O88597 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Becn1O88597 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Becn1O88597 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
Becn1O88597 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Becn1O88597 Etf1-202ENSMUST00000180351 108 ntBASIC21.75■■□□□ 1.07
Becn1O88597 Gm10399-202ENSMUST00000202768 748 ntBASIC21.75■■□□□ 1.07
Becn1O88597 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.75■■□□□ 1.07
Becn1O88597 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Becn1O88597 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms