Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.07■□□□□ 0.32
Cops3O88543 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cops3O88543 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cops3O88543 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cops3O88543 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cops3O88543 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.07■□□□□ 0.32
Cops3O88543 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cops3O88543 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cops3O88543 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cops3O88543 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cops3O88543 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.07■□□□□ 0.32
Cops3O88543 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cops3O88543 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cops3O88543 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Cops3O88543 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cops3O88543 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cops3O88543 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cops3O88543 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Cops3O88543 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cops3O88543 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.06■□□□□ 0.32
Cops3O88543 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.06■□□□□ 0.32
Cops3O88543 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cops3O88543 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cops3O88543 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cops3O88543 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cops3O88543 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cops3O88543 Gm14117-201ENSMUST00000122417 843 ntBASIC17.05■□□□□ 0.32
Cops3O88543 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cops3O88543 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.05■□□□□ 0.32
Cops3O88543 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cops3O88543 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cops3O88543 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cops3O88543 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cops3O88543 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cops3O88543 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cops3O88543 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Cops3O88543 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.04■□□□□ 0.32
Cops3O88543 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.04■□□□□ 0.32
Cops3O88543 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cops3O88543 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cops3O88543 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cops3O88543 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cops3O88543 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.04■□□□□ 0.32
Cops3O88543 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cops3O88543 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Cops3O88543 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cops3O88543 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cops3O88543 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cops3O88543 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cops3O88543 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cops3O88543 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cops3O88543 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cops3O88543 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cops3O88543 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cops3O88543 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cops3O88543 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cops3O88543 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cops3O88543 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cops3O88543 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.03■□□□□ 0.32
Cops3O88543 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Cops3O88543 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cops3O88543 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.03■□□□□ 0.32
Cops3O88543 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
Cops3O88543 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cops3O88543 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cops3O88543 BC021767-201ENSMUST00000126387 1716 ntBASIC17.03■□□□□ 0.32
Cops3O88543 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Cops3O88543 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cops3O88543 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cops3O88543 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cops3O88543 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cops3O88543 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cops3O88543 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cops3O88543 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cops3O88543 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cops3O88543 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.02■□□□□ 0.32
Cops3O88543 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.02■□□□□ 0.32
Cops3O88543 Gm45102-201ENSMUST00000207427 857 ntBASIC17.02■□□□□ 0.32
Cops3O88543 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cops3O88543 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cops3O88543 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cops3O88543 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.02■□□□□ 0.31
Cops3O88543 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cops3O88543 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cops3O88543 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cops3O88543 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cops3O88543 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cops3O88543 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cops3O88543 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cops3O88543 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cops3O88543 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cops3O88543 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cops3O88543 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.01■□□□□ 0.31
Cops3O88543 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cops3O88543 Serp2-204ENSMUST00000228055 705 ntBASIC17.01■□□□□ 0.31
Cops3O88543 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cops3O88543 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cops3O88543 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cops3O88543 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cops3O88543 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 127.9 ms