Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.13■□□□□ 0.97
IkbkbO88351 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
IkbkbO88351 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.13■□□□□ 0.97
IkbkbO88351 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
IkbkbO88351 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
IkbkbO88351 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
IkbkbO88351 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
IkbkbO88351 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
IkbkbO88351 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
IkbkbO88351 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
IkbkbO88351 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
IkbkbO88351 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
IkbkbO88351 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
IkbkbO88351 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
IkbkbO88351 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.12■□□□□ 0.97
IkbkbO88351 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
IkbkbO88351 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
IkbkbO88351 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.12■□□□□ 0.97
IkbkbO88351 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
IkbkbO88351 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.12■□□□□ 0.97
IkbkbO88351 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
IkbkbO88351 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
IkbkbO88351 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
IkbkbO88351 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
IkbkbO88351 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
IkbkbO88351 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
IkbkbO88351 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IkbkbO88351 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IkbkbO88351 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
IkbkbO88351 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
IkbkbO88351 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
IkbkbO88351 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
IkbkbO88351 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IkbkbO88351 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
IkbkbO88351 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
IkbkbO88351 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
IkbkbO88351 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.1■□□□□ 0.97
IkbkbO88351 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
IkbkbO88351 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
IkbkbO88351 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.1■□□□□ 0.97
IkbkbO88351 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.1■□□□□ 0.97
IkbkbO88351 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.1■□□□□ 0.97
IkbkbO88351 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
IkbkbO88351 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
IkbkbO88351 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
IkbkbO88351 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
IkbkbO88351 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
IkbkbO88351 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
IkbkbO88351 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
IkbkbO88351 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IkbkbO88351 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IkbkbO88351 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IkbkbO88351 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IkbkbO88351 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IkbkbO88351 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
IkbkbO88351 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IkbkbO88351 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IkbkbO88351 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IkbkbO88351 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
IkbkbO88351 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
IkbkbO88351 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
IkbkbO88351 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
IkbkbO88351 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.97
IkbkbO88351 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
IkbkbO88351 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.08■□□□□ 0.97
IkbkbO88351 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
IkbkbO88351 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IkbkbO88351 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IkbkbO88351 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
IkbkbO88351 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
IkbkbO88351 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.07■□□□□ 0.96
IkbkbO88351 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.07■□□□□ 0.96
IkbkbO88351 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.07■□□□□ 0.96
IkbkbO88351 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
IkbkbO88351 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IkbkbO88351 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IkbkbO88351 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
IkbkbO88351 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
IkbkbO88351 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.07■□□□□ 0.96
IkbkbO88351 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IkbkbO88351 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
IkbkbO88351 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.06■□□□□ 0.96
IkbkbO88351 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
IkbkbO88351 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
IkbkbO88351 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
IkbkbO88351 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IkbkbO88351 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IkbkbO88351 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
IkbkbO88351 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.05■□□□□ 0.96
IkbkbO88351 Gm42642-201ENSMUST00000200683 355 ntBASIC21.05■□□□□ 0.96
IkbkbO88351 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IkbkbO88351 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IkbkbO88351 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IkbkbO88351 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
IkbkbO88351 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
IkbkbO88351 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IkbkbO88351 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IkbkbO88351 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
IkbkbO88351 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IkbkbO88351 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms