Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chrna4O70174 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chrna4O70174 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chrna4O70174 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chrna4O70174 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chrna4O70174 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Chrna4O70174 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.31■□□□□ 0.68
Chrna4O70174 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chrna4O70174 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chrna4O70174 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Chrna4O70174 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chrna4O70174 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Chrna4O70174 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chrna4O70174 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Chrna4O70174 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chrna4O70174 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chrna4O70174 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chrna4O70174 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Chrna4O70174 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.3■□□□□ 0.68
Chrna4O70174 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Chrna4O70174 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Chrna4O70174 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Chrna4O70174 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna4O70174 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna4O70174 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna4O70174 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna4O70174 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna4O70174 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.29■□□□□ 0.68
Chrna4O70174 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna4O70174 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Chrna4O70174 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna4O70174 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Chrna4O70174 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna4O70174 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna4O70174 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Chrna4O70174 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Chrna4O70174 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Chrna4O70174 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chrna4O70174 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chrna4O70174 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chrna4O70174 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chrna4O70174 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chrna4O70174 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chrna4O70174 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chrna4O70174 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.28■□□□□ 0.68
Chrna4O70174 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chrna4O70174 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chrna4O70174 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chrna4O70174 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chrna4O70174 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Chrna4O70174 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chrna4O70174 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chrna4O70174 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.27■□□□□ 0.68
Chrna4O70174 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.27■□□□□ 0.68
Chrna4O70174 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.27■□□□□ 0.68
Chrna4O70174 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Chrna4O70174 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Chrna4O70174 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chrna4O70174 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chrna4O70174 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chrna4O70174 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Chrna4O70174 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chrna4O70174 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chrna4O70174 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna4O70174 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna4O70174 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.26■□□□□ 0.67
Chrna4O70174 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.26■□□□□ 0.67
Chrna4O70174 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna4O70174 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Chrna4O70174 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.26■□□□□ 0.67
Chrna4O70174 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna4O70174 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna4O70174 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna4O70174 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna4O70174 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.25■□□□□ 0.67
Chrna4O70174 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna4O70174 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.25■□□□□ 0.67
Chrna4O70174 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna4O70174 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna4O70174 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna4O70174 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.25■□□□□ 0.67
Chrna4O70174 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna4O70174 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.25■□□□□ 0.67
Chrna4O70174 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
Chrna4O70174 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.25■□□□□ 0.67
Chrna4O70174 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna4O70174 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna4O70174 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.24■□□□□ 0.67
Chrna4O70174 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna4O70174 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna4O70174 Gm7860-201ENSMUST00000121190 879 ntBASIC19.24■□□□□ 0.67
Chrna4O70174 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.24■□□□□ 0.67
Chrna4O70174 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Chrna4O70174 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna4O70174 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.24■□□□□ 0.67
Chrna4O70174 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna4O70174 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Chrna4O70174 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Chrna4O70174 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna4O70174 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms