Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Gm10231-201ENSMUST00000181584 441 ntBASIC19.16■□□□□ 0.66
Phox2bO35690 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Phox2bO35690 Gm10175-202ENSMUST00000208752 441 ntBASIC19.16■□□□□ 0.66
Phox2bO35690 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Phox2bO35690 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Phox2bO35690 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Phox2bO35690 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Phox2bO35690 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Phox2bO35690 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Phox2bO35690 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Phox2bO35690 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Phox2bO35690 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Phox2bO35690 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Phox2bO35690 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Phox2bO35690 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Phox2bO35690 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Phox2bO35690 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Phox2bO35690 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Phox2bO35690 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Phox2bO35690 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Phox2bO35690 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Phox2bO35690 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Phox2bO35690 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.14■□□□□ 0.65
Phox2bO35690 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Phox2bO35690 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Phox2bO35690 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Phox2bO35690 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Phox2bO35690 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Phox2bO35690 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Phox2bO35690 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Phox2bO35690 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Phox2bO35690 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Phox2bO35690 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Phox2bO35690 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Phox2bO35690 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.13■□□□□ 0.65
Phox2bO35690 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Phox2bO35690 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.13■□□□□ 0.65
Phox2bO35690 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Phox2bO35690 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Phox2bO35690 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Phox2bO35690 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Phox2bO35690 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Phox2bO35690 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Phox2bO35690 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Phox2bO35690 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.12■□□□□ 0.65
Phox2bO35690 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Phox2bO35690 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Phox2bO35690 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.12■□□□□ 0.65
Phox2bO35690 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Phox2bO35690 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Phox2bO35690 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Phox2bO35690 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Phox2bO35690 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Phox2bO35690 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.12■□□□□ 0.65
Phox2bO35690 Rab3c-203ENSMUST00000224180 967 ntBASIC19.12■□□□□ 0.65
Phox2bO35690 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Phox2bO35690 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.12■□□□□ 0.65
Phox2bO35690 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.12■□□□□ 0.65
Phox2bO35690 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Phox2bO35690 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.12■□□□□ 0.65
Phox2bO35690 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Phox2bO35690 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Phox2bO35690 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Phox2bO35690 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Phox2bO35690 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Phox2bO35690 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.11■□□□□ 0.65
Phox2bO35690 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Phox2bO35690 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.11■□□□□ 0.65
Phox2bO35690 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Phox2bO35690 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.11■□□□□ 0.65
Phox2bO35690 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Phox2bO35690 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Phox2bO35690 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Phox2bO35690 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Phox2bO35690 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Phox2bO35690 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Phox2bO35690 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Phox2bO35690 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Phox2bO35690 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Phox2bO35690 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Phox2bO35690 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Phox2bO35690 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Phox2bO35690 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.1■□□□□ 0.65
Phox2bO35690 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.1■□□□□ 0.65
Phox2bO35690 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.1■□□□□ 0.65
Phox2bO35690 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Phox2bO35690 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Phox2bO35690 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Phox2bO35690 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Phox2bO35690 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.1■□□□□ 0.65
Phox2bO35690 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Phox2bO35690 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Phox2bO35690 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Phox2bO35690 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.09■□□□□ 0.65
Phox2bO35690 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Phox2bO35690 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Phox2bO35690 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.09■□□□□ 0.65
Phox2bO35690 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Phox2bO35690 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Phox2bO35690 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms