Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn6O35454 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn6O35454 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn6O35454 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Clcn6O35454 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.06■□□□□ 0.8
Clcn6O35454 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn6O35454 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Clcn6O35454 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn6O35454 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Clcn6O35454 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn6O35454 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn6O35454 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn6O35454 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn6O35454 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Clcn6O35454 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn6O35454 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Clcn6O35454 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Clcn6O35454 Gm38116-201ENSMUST00000193873 1533 ntBASIC20.06■□□□□ 0.8
Clcn6O35454 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn6O35454 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn6O35454 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn6O35454 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Clcn6O35454 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Clcn6O35454 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn6O35454 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn6O35454 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn6O35454 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn6O35454 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Clcn6O35454 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn6O35454 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn6O35454 Gm43530-201ENSMUST00000195920 274 ntBASIC20.05■□□□□ 0.8
Clcn6O35454 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn6O35454 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn6O35454 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.05■□□□□ 0.8
Clcn6O35454 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn6O35454 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn6O35454 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Clcn6O35454 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.04■□□□□ 0.8
Clcn6O35454 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Clcn6O35454 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn6O35454 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.04■□□□□ 0.8
Clcn6O35454 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Clcn6O35454 Gm43553-201ENSMUST00000200900 685 ntBASIC20.04■□□□□ 0.8
Clcn6O35454 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn6O35454 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Clcn6O35454 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn6O35454 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.03■□□□□ 0.8
Clcn6O35454 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn6O35454 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn6O35454 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.03■□□□□ 0.8
Clcn6O35454 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.03■□□□□ 0.8
Clcn6O35454 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Clcn6O35454 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn6O35454 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn6O35454 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.03■□□□□ 0.8
Clcn6O35454 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn6O35454 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn6O35454 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn6O35454 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn6O35454 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clcn6O35454 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clcn6O35454 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clcn6O35454 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clcn6O35454 Gm12922-201ENSMUST00000120626 809 ntBASIC20.02■□□□□ 0.8
Clcn6O35454 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Clcn6O35454 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Clcn6O35454 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Clcn6O35454 CT010486.3-201ENSMUST00000224555 811 ntBASIC20.02■□□□□ 0.8
Clcn6O35454 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Clcn6O35454 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Clcn6O35454 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Clcn6O35454 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.02■□□□□ 0.79
Clcn6O35454 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn6O35454 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn6O35454 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn6O35454 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.01■□□□□ 0.79
Clcn6O35454 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn6O35454 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn6O35454 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.01■□□□□ 0.79
Clcn6O35454 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn6O35454 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn6O35454 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn6O35454 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn6O35454 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clcn6O35454 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clcn6O35454 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clcn6O35454 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clcn6O35454 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clcn6O35454 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clcn6O35454 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Clcn6O35454 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20■□□□□ 0.79
Clcn6O35454 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Clcn6O35454 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Clcn6O35454 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20■□□□□ 0.79
Clcn6O35454 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Clcn6O35454 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20■□□□□ 0.79
Clcn6O35454 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clcn6O35454 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clcn6O35454 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Clcn6O35454 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms