Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.51■□□□□ 0.23
Gfra3O35118 Gm37179-201ENSMUST00000194862 823 ntBASIC16.51■□□□□ 0.23
Gfra3O35118 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.51■□□□□ 0.23
Gfra3O35118 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gfra3O35118 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gfra3O35118 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.51■□□□□ 0.23
Gfra3O35118 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gfra3O35118 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Gfra3O35118 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Gfra3O35118 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Gfra3O35118 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Gfra3O35118 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.5■□□□□ 0.23
Gfra3O35118 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.5■□□□□ 0.23
Gfra3O35118 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gfra3O35118 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Gfra3O35118 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gfra3O35118 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gfra3O35118 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gfra3O35118 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gfra3O35118 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gfra3O35118 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Gfra3O35118 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gfra3O35118 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Gfra3O35118 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gfra3O35118 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gfra3O35118 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.49■□□□□ 0.23
Gfra3O35118 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Gfra3O35118 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Gfra3O35118 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.49■□□□□ 0.23
Gfra3O35118 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gfra3O35118 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gfra3O35118 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Gfra3O35118 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.49■□□□□ 0.23
Gfra3O35118 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gfra3O35118 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Gfra3O35118 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gfra3O35118 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gfra3O35118 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gfra3O35118 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gfra3O35118 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Gfra3O35118 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Gfra3O35118 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gfra3O35118 Gm29257-201ENSMUST00000186115 639 ntBASIC16.48■□□□□ 0.23
Gfra3O35118 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.48■□□□□ 0.23
Gfra3O35118 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.48■□□□□ 0.23
Gfra3O35118 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Gfra3O35118 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Gfra3O35118 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Gfra3O35118 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.48■□□□□ 0.23
Gfra3O35118 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gfra3O35118 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gfra3O35118 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gfra3O35118 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gfra3O35118 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.47■□□□□ 0.23
Gfra3O35118 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gfra3O35118 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Gfra3O35118 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Gfra3O35118 Gm7514-201ENSMUST00000209475 934 ntBASIC16.47■□□□□ 0.23
Gfra3O35118 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gfra3O35118 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.47■□□□□ 0.23
Gfra3O35118 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gfra3O35118 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gfra3O35118 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gfra3O35118 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Gfra3O35118 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gfra3O35118 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Gfra3O35118 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gfra3O35118 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gfra3O35118 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gfra3O35118 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gfra3O35118 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gfra3O35118 Gm7860-201ENSMUST00000121190 879 ntBASIC16.46■□□□□ 0.23
Gfra3O35118 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC16.46■□□□□ 0.23
Gfra3O35118 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.46■□□□□ 0.23
Gfra3O35118 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Gfra3O35118 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Gfra3O35118 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gfra3O35118 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
Gfra3O35118 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Gfra3O35118 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gfra3O35118 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Gfra3O35118 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Gfra3O35118 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gfra3O35118 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Gfra3O35118 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gfra3O35118 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gfra3O35118 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gfra3O35118 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gfra3O35118 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gfra3O35118 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Gfra3O35118 Gm13146-201ENSMUST00000118508 780 ntBASIC16.45■□□□□ 0.22
Gfra3O35118 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gfra3O35118 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.45■□□□□ 0.22
Gfra3O35118 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gfra3O35118 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gfra3O35118 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gfra3O35118 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gfra3O35118 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gfra3O35118 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Gfra3O35118 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms