Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Usp35M0QWN7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.45■□□□□ 0.86
Usp35M0QWN7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.45■□□□□ 0.86
Usp35M0QWN7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Usp35M0QWN7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp35M0QWN7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp35M0QWN7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp35M0QWN7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp35M0QWN7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp35M0QWN7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.45■□□□□ 0.86
Usp35M0QWN7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp35M0QWN7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp35M0QWN7 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp35M0QWN7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp35M0QWN7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
Usp35M0QWN7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp35M0QWN7 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.44■□□□□ 0.86
Usp35M0QWN7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Usp35M0QWN7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Usp35M0QWN7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp35M0QWN7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp35M0QWN7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.44■□□□□ 0.86
Usp35M0QWN7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.44■□□□□ 0.86
Usp35M0QWN7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp35M0QWN7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Usp35M0QWN7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp35M0QWN7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Usp35M0QWN7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp35M0QWN7 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp35M0QWN7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.43■□□□□ 0.86
Usp35M0QWN7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.43■□□□□ 0.86
Usp35M0QWN7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp35M0QWN7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp35M0QWN7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp35M0QWN7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Usp35M0QWN7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp35M0QWN7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.42■□□□□ 0.86
Usp35M0QWN7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Usp35M0QWN7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.42■□□□□ 0.86
Usp35M0QWN7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp35M0QWN7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.42■□□□□ 0.86
Usp35M0QWN7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.42■□□□□ 0.86
Usp35M0QWN7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Usp35M0QWN7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp35M0QWN7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp35M0QWN7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.42■□□□□ 0.86
Usp35M0QWN7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp35M0QWN7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp35M0QWN7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp35M0QWN7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Usp35M0QWN7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp35M0QWN7 Gm13234-201ENSMUST00000120010 747 ntBASIC20.41■□□□□ 0.86
Usp35M0QWN7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Usp35M0QWN7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.41■□□□□ 0.86
Usp35M0QWN7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Usp35M0QWN7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp35M0QWN7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp35M0QWN7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Usp35M0QWN7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp35M0QWN7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp35M0QWN7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.4■□□□□ 0.86
Usp35M0QWN7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.4■□□□□ 0.86
Usp35M0QWN7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Usp35M0QWN7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Usp35M0QWN7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
Usp35M0QWN7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp35M0QWN7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp35M0QWN7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.39■□□□□ 0.85
Usp35M0QWN7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp35M0QWN7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.39■□□□□ 0.85
Usp35M0QWN7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Usp35M0QWN7 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp35M0QWN7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp35M0QWN7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Usp35M0QWN7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp35M0QWN7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Usp35M0QWN7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Usp35M0QWN7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Usp35M0QWN7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp35M0QWN7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Usp35M0QWN7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp35M0QWN7 Reep4-203ENSMUST00000226563 1444 ntBASIC20.38■□□□□ 0.85
Usp35M0QWN7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Usp35M0QWN7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Usp35M0QWN7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.38■□□□□ 0.85
Usp35M0QWN7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Usp35M0QWN7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Usp35M0QWN7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp35M0QWN7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Usp35M0QWN7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Usp35M0QWN7 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Usp35M0QWN7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Usp35M0QWN7 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.37■□□□□ 0.85
Usp35M0QWN7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp35M0QWN7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp35M0QWN7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp35M0QWN7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.37■□□□□ 0.85
Usp35M0QWN7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp35M0QWN7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Usp35M0QWN7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms