Protein–RNA interactions for Protein: J3QNH3

Gm21788, Predicted gene, 21788, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21788J3QNH3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm21788J3QNH3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm21788J3QNH3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm21788J3QNH3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm21788J3QNH3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm21788J3QNH3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm21788J3QNH3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.13■□□□□ 0.17
Gm21788J3QNH3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Gm21788J3QNH3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm21788J3QNH3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Gm21788J3QNH3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm21788J3QNH3 Gm13241-201ENSMUST00000094493 780 ntBASIC16.13■□□□□ 0.17
Gm21788J3QNH3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm21788J3QNH3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Gm21788J3QNH3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm21788J3QNH3 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.13■□□□□ 0.17
Gm21788J3QNH3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Gm21788J3QNH3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Gm21788J3QNH3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
Gm21788J3QNH3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Gm21788J3QNH3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm21788J3QNH3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.12■□□□□ 0.17
Gm21788J3QNH3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm21788J3QNH3 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.12■□□□□ 0.17
Gm21788J3QNH3 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm21788J3QNH3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm21788J3QNH3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm21788J3QNH3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Gm21788J3QNH3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.12■□□□□ 0.17
Gm21788J3QNH3 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Gm21788J3QNH3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm21788J3QNH3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Gm21788J3QNH3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm21788J3QNH3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm21788J3QNH3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm21788J3QNH3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Gm21788J3QNH3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm21788J3QNH3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm21788J3QNH3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Gm21788J3QNH3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Gm21788J3QNH3 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm21788J3QNH3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Gm21788J3QNH3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm21788J3QNH3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm21788J3QNH3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm21788J3QNH3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm21788J3QNH3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm21788J3QNH3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Gm21788J3QNH3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm21788J3QNH3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm21788J3QNH3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm21788J3QNH3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm21788J3QNH3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm21788J3QNH3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
Gm21788J3QNH3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm21788J3QNH3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm21788J3QNH3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Gm21788J3QNH3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm21788J3QNH3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm21788J3QNH3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm21788J3QNH3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm21788J3QNH3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm21788J3QNH3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm21788J3QNH3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Gm21788J3QNH3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm21788J3QNH3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm21788J3QNH3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm21788J3QNH3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm21788J3QNH3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm21788J3QNH3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Gm21788J3QNH3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm21788J3QNH3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Gm21788J3QNH3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.09■□□□□ 0.17
Gm21788J3QNH3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.09■□□□□ 0.17
Gm21788J3QNH3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm21788J3QNH3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Gm21788J3QNH3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm21788J3QNH3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Gm21788J3QNH3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
Gm21788J3QNH3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Gm21788J3QNH3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Gm21788J3QNH3 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.08■□□□□ 0.17
Gm21788J3QNH3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm21788J3QNH3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Gm21788J3QNH3 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.08■□□□□ 0.16
Gm21788J3QNH3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm21788J3QNH3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Gm21788J3QNH3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm21788J3QNH3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Gm21788J3QNH3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm21788J3QNH3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm21788J3QNH3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm21788J3QNH3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm21788J3QNH3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm21788J3QNH3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.07■□□□□ 0.16
Gm21788J3QNH3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm21788J3QNH3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm21788J3QNH3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm21788J3QNH3 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.07■□□□□ 0.16
Gm21788J3QNH3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms