Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13d-3J3QMG8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13d-3J3QMG8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trav13d-3J3QMG8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav13d-3J3QMG8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trav13d-3J3QMG8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.82■□□□□ 0.28
Trav13d-3J3QMG8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13d-3J3QMG8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Trav13d-3J3QMG8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Trav13d-3J3QMG8 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.82■□□□□ 0.28
Trav13d-3J3QMG8 Gm43060-201ENSMUST00000200621 289 ntBASIC16.82■□□□□ 0.28
Trav13d-3J3QMG8 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.82■□□□□ 0.28
Trav13d-3J3QMG8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13d-3J3QMG8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13d-3J3QMG8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13d-3J3QMG8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13d-3J3QMG8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav13d-3J3QMG8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13d-3J3QMG8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trav13d-3J3QMG8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trav13d-3J3QMG8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13d-3J3QMG8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trav13d-3J3QMG8 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav13d-3J3QMG8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav13d-3J3QMG8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trav13d-3J3QMG8 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav13d-3J3QMG8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.81■□□□□ 0.28
Trav13d-3J3QMG8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trav13d-3J3QMG8 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Trav13d-3J3QMG8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav13d-3J3QMG8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav13d-3J3QMG8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav13d-3J3QMG8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13d-3J3QMG8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trav13d-3J3QMG8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13d-3J3QMG8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13d-3J3QMG8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13d-3J3QMG8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.8■□□□□ 0.28
Trav13d-3J3QMG8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13d-3J3QMG8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13d-3J3QMG8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13d-3J3QMG8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13d-3J3QMG8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13d-3J3QMG8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav13d-3J3QMG8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav13d-3J3QMG8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav13d-3J3QMG8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav13d-3J3QMG8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav13d-3J3QMG8 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Trav13d-3J3QMG8 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.79■□□□□ 0.28
Trav13d-3J3QMG8 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.79■□□□□ 0.28
Trav13d-3J3QMG8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav13d-3J3QMG8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav13d-3J3QMG8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav13d-3J3QMG8 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.78■□□□□ 0.28
Trav13d-3J3QMG8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav13d-3J3QMG8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trav13d-3J3QMG8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav13d-3J3QMG8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav13d-3J3QMG8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav13d-3J3QMG8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trav13d-3J3QMG8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav13d-3J3QMG8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav13d-3J3QMG8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav13d-3J3QMG8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav13d-3J3QMG8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav13d-3J3QMG8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13d-3J3QMG8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13d-3J3QMG8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13d-3J3QMG8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.77■□□□□ 0.28
Trav13d-3J3QMG8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13d-3J3QMG8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13d-3J3QMG8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Trav13d-3J3QMG8 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13d-3J3QMG8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13d-3J3QMG8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.77■□□□□ 0.28
Trav13d-3J3QMG8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13d-3J3QMG8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13d-3J3QMG8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13d-3J3QMG8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13d-3J3QMG8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13d-3J3QMG8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.77■□□□□ 0.27
Trav13d-3J3QMG8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trav13d-3J3QMG8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Trav13d-3J3QMG8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13d-3J3QMG8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13d-3J3QMG8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13d-3J3QMG8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trav13d-3J3QMG8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13d-3J3QMG8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.76■□□□□ 0.27
Trav13d-3J3QMG8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13d-3J3QMG8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13d-3J3QMG8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.76■□□□□ 0.27
Trav13d-3J3QMG8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13d-3J3QMG8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.76■□□□□ 0.27
Trav13d-3J3QMG8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13d-3J3QMG8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trav13d-3J3QMG8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13d-3J3QMG8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13d-3J3QMG8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms