Protein–RNA interactions for Protein: J3KMS6

Gm21818, MCG122238, isoform CRA_a, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21818J3KMS6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm21818J3KMS6 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm21818J3KMS6 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm21818J3KMS6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm21818J3KMS6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm21818J3KMS6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm21818J3KMS6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm21818J3KMS6 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm21818J3KMS6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm21818J3KMS6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm21818J3KMS6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Gm21818J3KMS6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm21818J3KMS6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm21818J3KMS6 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Gm21818J3KMS6 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
Gm21818J3KMS6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm21818J3KMS6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm21818J3KMS6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm21818J3KMS6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm21818J3KMS6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Gm21818J3KMS6 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Gm21818J3KMS6 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm21818J3KMS6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm21818J3KMS6 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm21818J3KMS6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm21818J3KMS6 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm21818J3KMS6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm21818J3KMS6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm21818J3KMS6 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.3■□□□□ 0.2
Gm21818J3KMS6 Gm9870-201ENSMUST00000063874 645 ntBASIC16.3■□□□□ 0.2
Gm21818J3KMS6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm21818J3KMS6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm21818J3KMS6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Gm21818J3KMS6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm21818J3KMS6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm21818J3KMS6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm21818J3KMS6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Gm21818J3KMS6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Gm21818J3KMS6 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm21818J3KMS6 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Gm21818J3KMS6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Gm21818J3KMS6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm21818J3KMS6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm21818J3KMS6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm21818J3KMS6 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.29■□□□□ 0.2
Gm21818J3KMS6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
Gm21818J3KMS6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm21818J3KMS6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
Gm21818J3KMS6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.29■□□□□ 0.2
Gm21818J3KMS6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm21818J3KMS6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm21818J3KMS6 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm21818J3KMS6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm21818J3KMS6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Gm21818J3KMS6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm21818J3KMS6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm21818J3KMS6 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Gm21818J3KMS6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Gm21818J3KMS6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm21818J3KMS6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Gm21818J3KMS6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.28■□□□□ 0.2
Gm21818J3KMS6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.28■□□□□ 0.2
Gm21818J3KMS6 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Gm21818J3KMS6 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Gm21818J3KMS6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.28■□□□□ 0.2
Gm21818J3KMS6 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm21818J3KMS6 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm21818J3KMS6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Gm21818J3KMS6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm21818J3KMS6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm21818J3KMS6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm21818J3KMS6 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm21818J3KMS6 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm21818J3KMS6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm21818J3KMS6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm21818J3KMS6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm21818J3KMS6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm21818J3KMS6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm21818J3KMS6 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm21818J3KMS6 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm21818J3KMS6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Gm21818J3KMS6 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.27■□□□□ 0.2
Gm21818J3KMS6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.27■□□□□ 0.2
Gm21818J3KMS6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Gm21818J3KMS6 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm21818J3KMS6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Gm21818J3KMS6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.19
Gm21818J3KMS6 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm21818J3KMS6 AA386476-201ENSMUST00000098781 1665 ntBASIC16.27■□□□□ 0.19
Gm21818J3KMS6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm21818J3KMS6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Gm21818J3KMS6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm21818J3KMS6 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Gm21818J3KMS6 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm21818J3KMS6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm21818J3KMS6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm21818J3KMS6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm21818J3KMS6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Gm21818J3KMS6 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.26■□□□□ 0.19
Gm21818J3KMS6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms