Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf6F6VAN0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf6F6VAN0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf6F6VAN0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf6F6VAN0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atf6F6VAN0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Atf6F6VAN0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atf6F6VAN0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atf6F6VAN0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.59■□□□□ 0.73
Atf6F6VAN0 Gm26833-201ENSMUST00000180899 440 ntBASIC19.59■□□□□ 0.73
Atf6F6VAN0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atf6F6VAN0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atf6F6VAN0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.59■□□□□ 0.73
Atf6F6VAN0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atf6F6VAN0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atf6F6VAN0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Atf6F6VAN0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atf6F6VAN0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Atf6F6VAN0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Atf6F6VAN0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Atf6F6VAN0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Atf6F6VAN0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Atf6F6VAN0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
Atf6F6VAN0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.58■□□□□ 0.72
Atf6F6VAN0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.58■□□□□ 0.72
Atf6F6VAN0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Atf6F6VAN0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Atf6F6VAN0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Atf6F6VAN0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Atf6F6VAN0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Atf6F6VAN0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Atf6F6VAN0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Atf6F6VAN0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Atf6F6VAN0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Atf6F6VAN0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.56■□□□□ 0.72
Atf6F6VAN0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atf6F6VAN0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atf6F6VAN0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atf6F6VAN0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Atf6F6VAN0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atf6F6VAN0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atf6F6VAN0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atf6F6VAN0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atf6F6VAN0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.56■□□□□ 0.72
Atf6F6VAN0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Atf6F6VAN0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Atf6F6VAN0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atf6F6VAN0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Atf6F6VAN0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Atf6F6VAN0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atf6F6VAN0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atf6F6VAN0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Atf6F6VAN0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Atf6F6VAN0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atf6F6VAN0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atf6F6VAN0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Atf6F6VAN0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Atf6F6VAN0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atf6F6VAN0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atf6F6VAN0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Atf6F6VAN0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atf6F6VAN0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Atf6F6VAN0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atf6F6VAN0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Atf6F6VAN0 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Atf6F6VAN0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Atf6F6VAN0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Atf6F6VAN0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Atf6F6VAN0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atf6F6VAN0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Atf6F6VAN0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.55■□□□□ 0.72
Atf6F6VAN0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Atf6F6VAN0 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.54■□□□□ 0.72
Atf6F6VAN0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Atf6F6VAN0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Atf6F6VAN0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Atf6F6VAN0 Gm27801-201ENSMUST00000184174 223 ntBASIC19.54■□□□□ 0.72
Atf6F6VAN0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Atf6F6VAN0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Atf6F6VAN0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Atf6F6VAN0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Atf6F6VAN0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.54■□□□□ 0.72
Atf6F6VAN0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Atf6F6VAN0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Atf6F6VAN0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.53■□□□□ 0.72
Atf6F6VAN0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atf6F6VAN0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atf6F6VAN0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Atf6F6VAN0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atf6F6VAN0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atf6F6VAN0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.53■□□□□ 0.72
Atf6F6VAN0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atf6F6VAN0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atf6F6VAN0 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atf6F6VAN0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atf6F6VAN0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atf6F6VAN0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.53■□□□□ 0.72
Atf6F6VAN0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atf6F6VAN0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Atf6F6VAN0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms