Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpsf4lE9Q2N0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cpsf4lE9Q2N0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cpsf4lE9Q2N0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cpsf4lE9Q2N0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cpsf4lE9Q2N0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cpsf4lE9Q2N0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cpsf4lE9Q2N0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cpsf4lE9Q2N0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.21■□□□□ 0.19
Cpsf4lE9Q2N0 Gm7860-201ENSMUST00000121190 879 ntBASIC16.21■□□□□ 0.19
Cpsf4lE9Q2N0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.21■□□□□ 0.19
Cpsf4lE9Q2N0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.21■□□□□ 0.19
Cpsf4lE9Q2N0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.21■□□□□ 0.19
Cpsf4lE9Q2N0 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.21■□□□□ 0.19
Cpsf4lE9Q2N0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cpsf4lE9Q2N0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cpsf4lE9Q2N0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.21■□□□□ 0.19
Cpsf4lE9Q2N0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cpsf4lE9Q2N0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cpsf4lE9Q2N0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Cpsf4lE9Q2N0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpsf4lE9Q2N0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpsf4lE9Q2N0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpsf4lE9Q2N0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.2■□□□□ 0.18
Cpsf4lE9Q2N0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpsf4lE9Q2N0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpsf4lE9Q2N0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cpsf4lE9Q2N0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cpsf4lE9Q2N0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpsf4lE9Q2N0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpsf4lE9Q2N0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpsf4lE9Q2N0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cpsf4lE9Q2N0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cpsf4lE9Q2N0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpsf4lE9Q2N0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cpsf4lE9Q2N0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpsf4lE9Q2N0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpsf4lE9Q2N0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Cpsf4lE9Q2N0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.19■□□□□ 0.18
Cpsf4lE9Q2N0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpsf4lE9Q2N0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpsf4lE9Q2N0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.19■□□□□ 0.18
Cpsf4lE9Q2N0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.19■□□□□ 0.18
Cpsf4lE9Q2N0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpsf4lE9Q2N0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpsf4lE9Q2N0 Gm9988-201ENSMUST00000069786 435 ntBASIC16.19■□□□□ 0.18
Cpsf4lE9Q2N0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpsf4lE9Q2N0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cpsf4lE9Q2N0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpsf4lE9Q2N0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cpsf4lE9Q2N0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpsf4lE9Q2N0 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.19■□□□□ 0.18
Cpsf4lE9Q2N0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.18■□□□□ 0.18
Cpsf4lE9Q2N0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.18■□□□□ 0.18
Cpsf4lE9Q2N0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cpsf4lE9Q2N0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpsf4lE9Q2N0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.18■□□□□ 0.18
Cpsf4lE9Q2N0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpsf4lE9Q2N0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpsf4lE9Q2N0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpsf4lE9Q2N0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cpsf4lE9Q2N0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.18■□□□□ 0.18
Cpsf4lE9Q2N0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpsf4lE9Q2N0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Cpsf4lE9Q2N0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cpsf4lE9Q2N0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpsf4lE9Q2N0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cpsf4lE9Q2N0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpsf4lE9Q2N0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpsf4lE9Q2N0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Cpsf4lE9Q2N0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf4lE9Q2N0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf4lE9Q2N0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf4lE9Q2N0 Gm38205-201ENSMUST00000192243 258 ntBASIC16.17■□□□□ 0.18
Cpsf4lE9Q2N0 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.17■□□□□ 0.18
Cpsf4lE9Q2N0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf4lE9Q2N0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cpsf4lE9Q2N0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Cpsf4lE9Q2N0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.17■□□□□ 0.18
Cpsf4lE9Q2N0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf4lE9Q2N0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf4lE9Q2N0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf4lE9Q2N0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf4lE9Q2N0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.16■□□□□ 0.18
Cpsf4lE9Q2N0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf4lE9Q2N0 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf4lE9Q2N0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf4lE9Q2N0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf4lE9Q2N0 Gm15039-201ENSMUST00000118914 875 ntBASIC16.16■□□□□ 0.18
Cpsf4lE9Q2N0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.16■□□□□ 0.18
Cpsf4lE9Q2N0 Gm10493-201ENSMUST00000097270 612 ntBASIC16.16■□□□□ 0.18
Cpsf4lE9Q2N0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Cpsf4lE9Q2N0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf4lE9Q2N0 Reep4-203ENSMUST00000226563 1444 ntBASIC16.16■□□□□ 0.18
Cpsf4lE9Q2N0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf4lE9Q2N0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cpsf4lE9Q2N0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf4lE9Q2N0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf4lE9Q2N0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf4lE9Q2N0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms