Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gm28043E0CXC2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gm28043E0CXC2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Gm28043E0CXC2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gm28043E0CXC2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gm28043E0CXC2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Gm28043E0CXC2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Gm28043E0CXC2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Gm28043E0CXC2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Gm28043E0CXC2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.08■□□□□ 0.65
Gm28043E0CXC2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Gm28043E0CXC2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Gm28043E0CXC2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Gm28043E0CXC2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Gm28043E0CXC2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Gm28043E0CXC2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
Gm28043E0CXC2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
Gm28043E0CXC2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.08■□□□□ 0.64
Gm28043E0CXC2 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gm28043E0CXC2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.08■□□□□ 0.64
Gm28043E0CXC2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
Gm28043E0CXC2 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gm28043E0CXC2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Gm28043E0CXC2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gm28043E0CXC2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gm28043E0CXC2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gm28043E0CXC2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gm28043E0CXC2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gm28043E0CXC2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gm28043E0CXC2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gm28043E0CXC2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gm28043E0CXC2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gm28043E0CXC2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Gm28043E0CXC2 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.07■□□□□ 0.64
Gm28043E0CXC2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.07■□□□□ 0.64
Gm28043E0CXC2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Gm28043E0CXC2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Gm28043E0CXC2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Gm28043E0CXC2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gm28043E0CXC2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Gm28043E0CXC2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm28043E0CXC2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm28043E0CXC2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gm28043E0CXC2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gm28043E0CXC2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm28043E0CXC2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm28043E0CXC2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm28043E0CXC2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.06■□□□□ 0.64
Gm28043E0CXC2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.06■□□□□ 0.64
Gm28043E0CXC2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm28043E0CXC2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gm28043E0CXC2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm28043E0CXC2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
Gm28043E0CXC2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm28043E0CXC2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm28043E0CXC2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm28043E0CXC2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm28043E0CXC2 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.05■□□□□ 0.64
Gm28043E0CXC2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm28043E0CXC2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm28043E0CXC2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm28043E0CXC2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Gm28043E0CXC2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Gm28043E0CXC2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm28043E0CXC2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm28043E0CXC2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm28043E0CXC2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Gm28043E0CXC2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Gm28043E0CXC2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Gm28043E0CXC2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Gm28043E0CXC2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Gm28043E0CXC2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm28043E0CXC2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.04■□□□□ 0.64
Gm28043E0CXC2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Gm28043E0CXC2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm28043E0CXC2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.04■□□□□ 0.64
Gm28043E0CXC2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm28043E0CXC2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Gm28043E0CXC2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Gm28043E0CXC2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm28043E0CXC2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm28043E0CXC2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.03■□□□□ 0.64
Gm28043E0CXC2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Gm28043E0CXC2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Gm28043E0CXC2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm28043E0CXC2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm28043E0CXC2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm28043E0CXC2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Gm28043E0CXC2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Gm28043E0CXC2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Gm28043E0CXC2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm28043E0CXC2 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.03■□□□□ 0.64
Gm28043E0CXC2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.02■□□□□ 0.64
Gm28043E0CXC2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.02■□□□□ 0.64
Gm28043E0CXC2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Gm28043E0CXC2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Gm28043E0CXC2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm28043E0CXC2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm28043E0CXC2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.02■□□□□ 0.64
Gm28043E0CXC2 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms