Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shank1D3YZU1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.12■□□□□ 0.33
Shank1D3YZU1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shank1D3YZU1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.12■□□□□ 0.33
Shank1D3YZU1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shank1D3YZU1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shank1D3YZU1 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shank1D3YZU1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Shank1D3YZU1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Shank1D3YZU1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.11■□□□□ 0.33
Shank1D3YZU1 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shank1D3YZU1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shank1D3YZU1 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shank1D3YZU1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shank1D3YZU1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Shank1D3YZU1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Shank1D3YZU1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.11■□□□□ 0.33
Shank1D3YZU1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shank1D3YZU1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Shank1D3YZU1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.11■□□□□ 0.33
Shank1D3YZU1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Shank1D3YZU1 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.11■□□□□ 0.33
Shank1D3YZU1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shank1D3YZU1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shank1D3YZU1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shank1D3YZU1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Shank1D3YZU1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shank1D3YZU1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Shank1D3YZU1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shank1D3YZU1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shank1D3YZU1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shank1D3YZU1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shank1D3YZU1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shank1D3YZU1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shank1D3YZU1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Shank1D3YZU1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shank1D3YZU1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shank1D3YZU1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shank1D3YZU1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shank1D3YZU1 Gm12896-201ENSMUST00000118430 226 ntBASIC17.09■□□□□ 0.33
Shank1D3YZU1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shank1D3YZU1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Shank1D3YZU1 Gm37055-201ENSMUST00000191866 133 ntBASIC17.09■□□□□ 0.33
Shank1D3YZU1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shank1D3YZU1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shank1D3YZU1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shank1D3YZU1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.09■□□□□ 0.33
Shank1D3YZU1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shank1D3YZU1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.08■□□□□ 0.33
Shank1D3YZU1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Shank1D3YZU1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shank1D3YZU1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Shank1D3YZU1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.08■□□□□ 0.32
Shank1D3YZU1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Shank1D3YZU1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shank1D3YZU1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Shank1D3YZU1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Shank1D3YZU1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shank1D3YZU1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Shank1D3YZU1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shank1D3YZU1 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.07■□□□□ 0.32
Shank1D3YZU1 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.07■□□□□ 0.32
Shank1D3YZU1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Shank1D3YZU1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank1D3YZU1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank1D3YZU1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank1D3YZU1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Shank1D3YZU1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank1D3YZU1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.07■□□□□ 0.32
Shank1D3YZU1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank1D3YZU1 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.07■□□□□ 0.32
Shank1D3YZU1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shank1D3YZU1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shank1D3YZU1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.06■□□□□ 0.32
Shank1D3YZU1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shank1D3YZU1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Shank1D3YZU1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Shank1D3YZU1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shank1D3YZU1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shank1D3YZU1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Shank1D3YZU1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.06■□□□□ 0.32
Shank1D3YZU1 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.06■□□□□ 0.32
Shank1D3YZU1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Shank1D3YZU1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.06■□□□□ 0.32
Shank1D3YZU1 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.06■□□□□ 0.32
Shank1D3YZU1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank1D3YZU1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank1D3YZU1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank1D3YZU1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank1D3YZU1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.05■□□□□ 0.32
Shank1D3YZU1 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Shank1D3YZU1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank1D3YZU1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank1D3YZU1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Shank1D3YZU1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank1D3YZU1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Shank1D3YZU1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank1D3YZU1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank1D3YZU1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.05■□□□□ 0.32
Shank1D3YZU1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms