Protein–RNA interactions for Protein: A3KMP2

Ttc38, Tetratricopeptide repeat protein 38, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc38A3KMP2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ttc38A3KMP2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ttc38A3KMP2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Ttc38A3KMP2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.83■□□□□ 0.93
Ttc38A3KMP2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Ttc38A3KMP2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.83■□□□□ 0.93
Ttc38A3KMP2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ttc38A3KMP2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ttc38A3KMP2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ttc38A3KMP2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Ttc38A3KMP2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ttc38A3KMP2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ttc38A3KMP2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ttc38A3KMP2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ttc38A3KMP2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ttc38A3KMP2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Ttc38A3KMP2 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.82■□□□□ 0.92
Ttc38A3KMP2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ttc38A3KMP2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.82■□□□□ 0.92
Ttc38A3KMP2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ttc38A3KMP2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ttc38A3KMP2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ttc38A3KMP2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ttc38A3KMP2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.82■□□□□ 0.92
Ttc38A3KMP2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ttc38A3KMP2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ttc38A3KMP2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ttc38A3KMP2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ttc38A3KMP2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ttc38A3KMP2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ttc38A3KMP2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ttc38A3KMP2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ttc38A3KMP2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ttc38A3KMP2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ttc38A3KMP2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Ttc38A3KMP2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ttc38A3KMP2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ttc38A3KMP2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ttc38A3KMP2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ttc38A3KMP2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Ttc38A3KMP2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ttc38A3KMP2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ttc38A3KMP2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ttc38A3KMP2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Ttc38A3KMP2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ttc38A3KMP2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ttc38A3KMP2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ttc38A3KMP2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.81■□□□□ 0.92
Ttc38A3KMP2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ttc38A3KMP2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ttc38A3KMP2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ttc38A3KMP2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ttc38A3KMP2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.8■□□□□ 0.92
Ttc38A3KMP2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Ttc38A3KMP2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.8■□□□□ 0.92
Ttc38A3KMP2 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.8■□□□□ 0.92
Ttc38A3KMP2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ttc38A3KMP2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ttc38A3KMP2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ttc38A3KMP2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ttc38A3KMP2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.79■□□□□ 0.92
Ttc38A3KMP2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ttc38A3KMP2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ttc38A3KMP2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ttc38A3KMP2 Gm43060-201ENSMUST00000200621 289 ntBASIC20.79■□□□□ 0.92
Ttc38A3KMP2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ttc38A3KMP2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ttc38A3KMP2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.79■□□□□ 0.92
Ttc38A3KMP2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ttc38A3KMP2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ttc38A3KMP2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ttc38A3KMP2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ttc38A3KMP2 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.78■□□□□ 0.92
Ttc38A3KMP2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ttc38A3KMP2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ttc38A3KMP2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ttc38A3KMP2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ttc38A3KMP2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ttc38A3KMP2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.78■□□□□ 0.92
Ttc38A3KMP2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Ttc38A3KMP2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ttc38A3KMP2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ttc38A3KMP2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ttc38A3KMP2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ttc38A3KMP2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ttc38A3KMP2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Ttc38A3KMP2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.77■□□□□ 0.92
Ttc38A3KMP2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ttc38A3KMP2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ttc38A3KMP2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ttc38A3KMP2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Ttc38A3KMP2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Ttc38A3KMP2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ttc38A3KMP2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ttc38A3KMP2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Ttc38A3KMP2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ttc38A3KMP2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Ttc38A3KMP2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.76■□□□□ 0.91
Ttc38A3KMP2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.76■□□□□ 0.91
Ttc38A3KMP2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms