Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.83
Scn1aA2APX8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn1aA2APX8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn1aA2APX8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn1aA2APX8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Scn1aA2APX8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Scn1aA2APX8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn1aA2APX8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn1aA2APX8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn1aA2APX8 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.19■□□□□ 0.82
Scn1aA2APX8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn1aA2APX8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn1aA2APX8 Golph3-202ENSMUST00000226517 2359 ntBASIC20.19■□□□□ 0.82
Scn1aA2APX8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn1aA2APX8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn1aA2APX8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn1aA2APX8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Scn1aA2APX8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.18■□□□□ 0.82
Scn1aA2APX8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn1aA2APX8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn1aA2APX8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scn1aA2APX8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn1aA2APX8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.18■□□□□ 0.82
Scn1aA2APX8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn1aA2APX8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn1aA2APX8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn1aA2APX8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Scn1aA2APX8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn1aA2APX8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.17■□□□□ 0.82
Scn1aA2APX8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Scn1aA2APX8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn1aA2APX8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn1aA2APX8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Scn1aA2APX8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Scn1aA2APX8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Scn1aA2APX8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Scn1aA2APX8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn1aA2APX8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Scn1aA2APX8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.16■□□□□ 0.82
Scn1aA2APX8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn1aA2APX8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn1aA2APX8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn1aA2APX8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Scn1aA2APX8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Scn1aA2APX8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
Scn1aA2APX8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn1aA2APX8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn1aA2APX8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Scn1aA2APX8 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.15■□□□□ 0.82
Scn1aA2APX8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn1aA2APX8 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.15■□□□□ 0.82
Scn1aA2APX8 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Scn1aA2APX8 Gm6211-202ENSMUST00000167849 925 ntBASIC20.15■□□□□ 0.82
Scn1aA2APX8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Scn1aA2APX8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
Scn1aA2APX8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn1aA2APX8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Scn1aA2APX8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn1aA2APX8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn1aA2APX8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn1aA2APX8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn1aA2APX8 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.14■□□□□ 0.81
Scn1aA2APX8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Scn1aA2APX8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Scn1aA2APX8 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.14■□□□□ 0.81
Scn1aA2APX8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Scn1aA2APX8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Scn1aA2APX8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scn1aA2APX8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Scn1aA2APX8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Scn1aA2APX8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.13■□□□□ 0.81
Scn1aA2APX8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scn1aA2APX8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Scn1aA2APX8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scn1aA2APX8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn1aA2APX8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn1aA2APX8 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.12■□□□□ 0.81
Scn1aA2APX8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Scn1aA2APX8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn1aA2APX8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn1aA2APX8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Scn1aA2APX8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn1aA2APX8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Scn1aA2APX8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Scn1aA2APX8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn1aA2APX8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Scn1aA2APX8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn1aA2APX8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.12■□□□□ 0.81
Scn1aA2APX8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Scn1aA2APX8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn1aA2APX8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn1aA2APX8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn1aA2APX8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Scn1aA2APX8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn1aA2APX8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Scn1aA2APX8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn1aA2APX8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn1aA2APX8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.1■□□□□ 0.81
Scn1aA2APX8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.1■□□□□ 0.81
Scn1aA2APX8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms