Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Gm10013-201ENSMUST00000106074 672 ntBASIC30.78■■■□□ 2.52
Shroom2A2ALU4 AA414768-201ENSMUST00000121924 1257 ntBASIC30.78■■■□□ 2.52
Shroom2A2ALU4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
Shroom2A2ALU4 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Shroom2A2ALU4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Shroom2A2ALU4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Shroom2A2ALU4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Shroom2A2ALU4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Shroom2A2ALU4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC30.77■■■□□ 2.52
Shroom2A2ALU4 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Shroom2A2ALU4 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC30.77■■■□□ 2.52
Shroom2A2ALU4 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
Shroom2A2ALU4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
Shroom2A2ALU4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC30.77■■■□□ 2.52
Shroom2A2ALU4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC30.77■■■□□ 2.52
Shroom2A2ALU4 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC30.76■■■□□ 2.52
Shroom2A2ALU4 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
Shroom2A2ALU4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.51
Shroom2A2ALU4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Shroom2A2ALU4 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Shroom2A2ALU4 Gm5867-201ENSMUST00000063197 592 ntBASIC30.76■■■□□ 2.51
Shroom2A2ALU4 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Shroom2A2ALU4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Shroom2A2ALU4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Shroom2A2ALU4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
Shroom2A2ALU4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Shroom2A2ALU4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC30.75■■■□□ 2.51
Shroom2A2ALU4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC30.75■■■□□ 2.51
Shroom2A2ALU4 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Shroom2A2ALU4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC30.74■■■□□ 2.51
Shroom2A2ALU4 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Shroom2A2ALU4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC30.74■■■□□ 2.51
Shroom2A2ALU4 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC30.74■■■□□ 2.51
Shroom2A2ALU4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
Shroom2A2ALU4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC30.74■■■□□ 2.51
Shroom2A2ALU4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC30.74■■■□□ 2.51
Shroom2A2ALU4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Shroom2A2ALU4 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Shroom2A2ALU4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC30.74■■■□□ 2.51
Shroom2A2ALU4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Shroom2A2ALU4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Shroom2A2ALU4 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
Shroom2A2ALU4 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Shroom2A2ALU4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Shroom2A2ALU4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Shroom2A2ALU4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Shroom2A2ALU4 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Shroom2A2ALU4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Shroom2A2ALU4 Gm18032-201ENSMUST00000222541 538 ntBASIC30.72■■■□□ 2.51
Shroom2A2ALU4 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Shroom2A2ALU4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC30.72■■■□□ 2.51
Shroom2A2ALU4 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Shroom2A2ALU4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC30.71■■■□□ 2.51
Shroom2A2ALU4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Shroom2A2ALU4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC30.71■■■□□ 2.51
Shroom2A2ALU4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
Shroom2A2ALU4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
Shroom2A2ALU4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Shroom2A2ALU4 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Shroom2A2ALU4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Shroom2A2ALU4 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Shroom2A2ALU4 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
Shroom2A2ALU4 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
Shroom2A2ALU4 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
Shroom2A2ALU4 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.5
Shroom2A2ALU4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
Shroom2A2ALU4 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
Shroom2A2ALU4 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC30.7■■■□□ 2.5
Shroom2A2ALU4 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Shroom2A2ALU4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC30.69■■■□□ 2.5
Shroom2A2ALU4 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Shroom2A2ALU4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC30.69■■■□□ 2.5
Shroom2A2ALU4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC30.68■■■□□ 2.5
Shroom2A2ALU4 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC30.68■■■□□ 2.5
Shroom2A2ALU4 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Shroom2A2ALU4 Gm27032-201ENSMUST00000183124 1116 ntBASIC30.68■■■□□ 2.5
Shroom2A2ALU4 Gm16042-201ENSMUST00000204813 1247 ntBASIC30.68■■■□□ 2.5
Shroom2A2ALU4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Shroom2A2ALU4 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Shroom2A2ALU4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Shroom2A2ALU4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Shroom2A2ALU4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC30.67■■■□□ 2.5
Shroom2A2ALU4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Shroom2A2ALU4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Shroom2A2ALU4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Shroom2A2ALU4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Shroom2A2ALU4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Shroom2A2ALU4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Shroom2A2ALU4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC30.66■■■□□ 2.5
Shroom2A2ALU4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC30.66■■■□□ 2.5
Shroom2A2ALU4 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Shroom2A2ALU4 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Shroom2A2ALU4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Shroom2A2ALU4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
Shroom2A2ALU4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
Shroom2A2ALU4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Shroom2A2ALU4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Shroom2A2ALU4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
Shroom2A2ALU4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Shroom2A2ALU4 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms