Protein–RNA interactions for Protein: A2AKX3

Setx, Probable helicase senataxin, mousemouse

Predictions only

Length 2,646 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SetxA2AKX3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SetxA2AKX3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SetxA2AKX3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SetxA2AKX3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SetxA2AKX3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.6■□□□□ 0.41
SetxA2AKX3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SetxA2AKX3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SetxA2AKX3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SetxA2AKX3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.59■□□□□ 0.41
SetxA2AKX3 Gm44549-201ENSMUST00000208351 577 ntBASIC17.59■□□□□ 0.41
SetxA2AKX3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SetxA2AKX3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SetxA2AKX3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SetxA2AKX3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
SetxA2AKX3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
SetxA2AKX3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SetxA2AKX3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.59■□□□□ 0.41
SetxA2AKX3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SetxA2AKX3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SetxA2AKX3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SetxA2AKX3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SetxA2AKX3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SetxA2AKX3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SetxA2AKX3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SetxA2AKX3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SetxA2AKX3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SetxA2AKX3 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SetxA2AKX3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SetxA2AKX3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.58■□□□□ 0.4
SetxA2AKX3 Gm7860-201ENSMUST00000121190 879 ntBASIC17.58■□□□□ 0.4
SetxA2AKX3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SetxA2AKX3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SetxA2AKX3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.57■□□□□ 0.4
SetxA2AKX3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.57■□□□□ 0.4
SetxA2AKX3 Gm13158-201ENSMUST00000122007 736 ntBASIC17.57■□□□□ 0.4
SetxA2AKX3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SetxA2AKX3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SetxA2AKX3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SetxA2AKX3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SetxA2AKX3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SetxA2AKX3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SetxA2AKX3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SetxA2AKX3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SetxA2AKX3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SetxA2AKX3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.56■□□□□ 0.4
SetxA2AKX3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.56■□□□□ 0.4
SetxA2AKX3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SetxA2AKX3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SetxA2AKX3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SetxA2AKX3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SetxA2AKX3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SetxA2AKX3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SetxA2AKX3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.55■□□□□ 0.4
SetxA2AKX3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SetxA2AKX3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SetxA2AKX3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SetxA2AKX3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.55■□□□□ 0.4
SetxA2AKX3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SetxA2AKX3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SetxA2AKX3 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.55■□□□□ 0.4
SetxA2AKX3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SetxA2AKX3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SetxA2AKX3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SetxA2AKX3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SetxA2AKX3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SetxA2AKX3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SetxA2AKX3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SetxA2AKX3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SetxA2AKX3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SetxA2AKX3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SetxA2AKX3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SetxA2AKX3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SetxA2AKX3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SetxA2AKX3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.53■□□□□ 0.4
SetxA2AKX3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SetxA2AKX3 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.53■□□□□ 0.4
SetxA2AKX3 Gm18101-201ENSMUST00000215769 548 ntBASIC17.53■□□□□ 0.4
SetxA2AKX3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SetxA2AKX3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SetxA2AKX3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.53■□□□□ 0.4
SetxA2AKX3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
SetxA2AKX3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.53■□□□□ 0.4
SetxA2AKX3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.53■□□□□ 0.4
SetxA2AKX3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SetxA2AKX3 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.53■□□□□ 0.4
SetxA2AKX3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SetxA2AKX3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SetxA2AKX3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SetxA2AKX3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SetxA2AKX3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SetxA2AKX3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SetxA2AKX3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SetxA2AKX3 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SetxA2AKX3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SetxA2AKX3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SetxA2AKX3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SetxA2AKX3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SetxA2AKX3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SetxA2AKX3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SetxA2AKX3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms