Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IsxA1A546 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IsxA1A546 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
IsxA1A546 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IsxA1A546 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IsxA1A546 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IsxA1A546 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
IsxA1A546 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IsxA1A546 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IsxA1A546 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
IsxA1A546 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.75■□□□□ 0.43
IsxA1A546 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IsxA1A546 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IsxA1A546 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.75■□□□□ 0.43
IsxA1A546 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.75■□□□□ 0.43
IsxA1A546 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
IsxA1A546 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IsxA1A546 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
IsxA1A546 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
IsxA1A546 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
IsxA1A546 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IsxA1A546 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
IsxA1A546 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.74■□□□□ 0.43
IsxA1A546 Gm15820-201ENSMUST00000201566 728 ntBASIC17.74■□□□□ 0.43
IsxA1A546 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
IsxA1A546 Fst-202ENSMUST00000223640 2612 ntBASIC17.74■□□□□ 0.43
IsxA1A546 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
IsxA1A546 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.74■□□□□ 0.43
IsxA1A546 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
IsxA1A546 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
IsxA1A546 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
IsxA1A546 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
IsxA1A546 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
IsxA1A546 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.73■□□□□ 0.43
IsxA1A546 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IsxA1A546 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
IsxA1A546 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
IsxA1A546 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IsxA1A546 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.73■□□□□ 0.43
IsxA1A546 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
IsxA1A546 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IsxA1A546 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IsxA1A546 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
IsxA1A546 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.73■□□□□ 0.43
IsxA1A546 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.73■□□□□ 0.43
IsxA1A546 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
IsxA1A546 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
IsxA1A546 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IsxA1A546 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IsxA1A546 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IsxA1A546 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
IsxA1A546 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
IsxA1A546 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
IsxA1A546 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IsxA1A546 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
IsxA1A546 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IsxA1A546 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
IsxA1A546 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IsxA1A546 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IsxA1A546 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IsxA1A546 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.72■□□□□ 0.43
IsxA1A546 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IsxA1A546 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IsxA1A546 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IsxA1A546 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IsxA1A546 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
IsxA1A546 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IsxA1A546 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.72■□□□□ 0.43
IsxA1A546 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.71■□□□□ 0.43
IsxA1A546 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.71■□□□□ 0.43
IsxA1A546 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.71■□□□□ 0.43
IsxA1A546 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
IsxA1A546 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
IsxA1A546 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IsxA1A546 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.71■□□□□ 0.43
IsxA1A546 Gm13238-201ENSMUST00000117655 780 ntBASIC17.71■□□□□ 0.43
IsxA1A546 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
IsxA1A546 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
IsxA1A546 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.71■□□□□ 0.43
IsxA1A546 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.71■□□□□ 0.43
IsxA1A546 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IsxA1A546 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
IsxA1A546 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IsxA1A546 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.71■□□□□ 0.42
IsxA1A546 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
IsxA1A546 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IsxA1A546 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IsxA1A546 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
IsxA1A546 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IsxA1A546 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
IsxA1A546 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.7■□□□□ 0.42
IsxA1A546 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
IsxA1A546 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IsxA1A546 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.7■□□□□ 0.42
IsxA1A546 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.7■□□□□ 0.42
IsxA1A546 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
IsxA1A546 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.7■□□□□ 0.42
IsxA1A546 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IsxA1A546 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
IsxA1A546 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms