Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm28729A0A1B0GSW2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm28729A0A1B0GSW2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm28729A0A1B0GSW2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Gm28729A0A1B0GSW2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.77■□□□□ 0.6
Gm28729A0A1B0GSW2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.77■□□□□ 0.6
Gm28729A0A1B0GSW2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Gm28729A0A1B0GSW2 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.77■□□□□ 0.6
Gm28729A0A1B0GSW2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gm28729A0A1B0GSW2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm28729A0A1B0GSW2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm28729A0A1B0GSW2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm28729A0A1B0GSW2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm28729A0A1B0GSW2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm28729A0A1B0GSW2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gm28729A0A1B0GSW2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gm28729A0A1B0GSW2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm28729A0A1B0GSW2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm28729A0A1B0GSW2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.77■□□□□ 0.59
Gm28729A0A1B0GSW2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gm28729A0A1B0GSW2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm28729A0A1B0GSW2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm28729A0A1B0GSW2 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.76■□□□□ 0.59
Gm28729A0A1B0GSW2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm28729A0A1B0GSW2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm28729A0A1B0GSW2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm28729A0A1B0GSW2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
Gm28729A0A1B0GSW2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gm28729A0A1B0GSW2 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.76■□□□□ 0.59
Gm28729A0A1B0GSW2 Gm37856-201ENSMUST00000191634 999 ntBASIC18.76■□□□□ 0.59
Gm28729A0A1B0GSW2 Gm26524-201ENSMUST00000192339 390 ntBASIC18.76■□□□□ 0.59
Gm28729A0A1B0GSW2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm28729A0A1B0GSW2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm28729A0A1B0GSW2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gm28729A0A1B0GSW2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm28729A0A1B0GSW2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Gm28729A0A1B0GSW2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm28729A0A1B0GSW2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm28729A0A1B0GSW2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.75■□□□□ 0.59
Gm28729A0A1B0GSW2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.75■□□□□ 0.59
Gm28729A0A1B0GSW2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm28729A0A1B0GSW2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
Gm28729A0A1B0GSW2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.75■□□□□ 0.59
Gm28729A0A1B0GSW2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm28729A0A1B0GSW2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Gm28729A0A1B0GSW2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28729A0A1B0GSW2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28729A0A1B0GSW2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28729A0A1B0GSW2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
Gm28729A0A1B0GSW2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28729A0A1B0GSW2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28729A0A1B0GSW2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.74■□□□□ 0.59
Gm28729A0A1B0GSW2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.74■□□□□ 0.59
Gm28729A0A1B0GSW2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28729A0A1B0GSW2 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.74■□□□□ 0.59
Gm28729A0A1B0GSW2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Gm28729A0A1B0GSW2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28729A0A1B0GSW2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Gm28729A0A1B0GSW2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28729A0A1B0GSW2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Gm28729A0A1B0GSW2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28729A0A1B0GSW2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm28729A0A1B0GSW2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.73■□□□□ 0.59
Gm28729A0A1B0GSW2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.73■□□□□ 0.59
Gm28729A0A1B0GSW2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.73■□□□□ 0.59
Gm28729A0A1B0GSW2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm28729A0A1B0GSW2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm28729A0A1B0GSW2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Gm28729A0A1B0GSW2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Gm28729A0A1B0GSW2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Gm28729A0A1B0GSW2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.72■□□□□ 0.59
Gm28729A0A1B0GSW2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm28729A0A1B0GSW2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gm28729A0A1B0GSW2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gm28729A0A1B0GSW2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm28729A0A1B0GSW2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm28729A0A1B0GSW2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gm28729A0A1B0GSW2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm28729A0A1B0GSW2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gm28729A0A1B0GSW2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Gm28729A0A1B0GSW2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm28729A0A1B0GSW2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm28729A0A1B0GSW2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm28729A0A1B0GSW2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm28729A0A1B0GSW2 Gm13168-201ENSMUST00000121771 632 ntBASIC18.71■□□□□ 0.59
Gm28729A0A1B0GSW2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.71■□□□□ 0.59
Gm28729A0A1B0GSW2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm28729A0A1B0GSW2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Gm28729A0A1B0GSW2 Gm8520-201ENSMUST00000186517 868 ntBASIC18.71■□□□□ 0.59
Gm28729A0A1B0GSW2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm28729A0A1B0GSW2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Gm28729A0A1B0GSW2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm28729A0A1B0GSW2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm28729A0A1B0GSW2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm28729A0A1B0GSW2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm28729A0A1B0GSW2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gm28729A0A1B0GSW2 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.7■□□□□ 0.58
Gm28729A0A1B0GSW2 Rab3c-203ENSMUST00000224180 967 ntBASIC18.7■□□□□ 0.58
Gm28729A0A1B0GSW2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Gm28729A0A1B0GSW2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms