Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv3-5A0A140T8M6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv3-5A0A140T8M6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv3-5A0A140T8M6 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv3-5A0A140T8M6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv3-5A0A140T8M6 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.08□□□□□ -0.48
Igkv3-5A0A140T8M6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv3-5A0A140T8M6 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv3-5A0A140T8M6 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv3-5A0A140T8M6 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv3-5A0A140T8M6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv3-5A0A140T8M6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv3-5A0A140T8M6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv3-5A0A140T8M6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv3-5A0A140T8M6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv3-5A0A140T8M6 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv3-5A0A140T8M6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv3-5A0A140T8M6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC12.07□□□□□ -0.48
Igkv3-5A0A140T8M6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv3-5A0A140T8M6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv3-5A0A140T8M6 Gm5812-201ENSMUST00000061073 957 ntBASIC12.07□□□□□ -0.48
Igkv3-5A0A140T8M6 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv3-5A0A140T8M6 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv3-5A0A140T8M6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv3-5A0A140T8M6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv3-5A0A140T8M6 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Igkv3-5A0A140T8M6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv3-5A0A140T8M6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Igkv3-5A0A140T8M6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv3-5A0A140T8M6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv3-5A0A140T8M6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv3-5A0A140T8M6 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv3-5A0A140T8M6 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Igkv3-5A0A140T8M6 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv3-5A0A140T8M6 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv3-5A0A140T8M6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv3-5A0A140T8M6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv3-5A0A140T8M6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv3-5A0A140T8M6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv3-5A0A140T8M6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv3-5A0A140T8M6 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv3-5A0A140T8M6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv3-5A0A140T8M6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Igkv3-5A0A140T8M6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv3-5A0A140T8M6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv3-5A0A140T8M6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv3-5A0A140T8M6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv3-5A0A140T8M6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv3-5A0A140T8M6 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv3-5A0A140T8M6 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv3-5A0A140T8M6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Igkv3-5A0A140T8M6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv3-5A0A140T8M6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv3-5A0A140T8M6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv3-5A0A140T8M6 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv3-5A0A140T8M6 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Igkv3-5A0A140T8M6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv3-5A0A140T8M6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv3-5A0A140T8M6 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv3-5A0A140T8M6 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.05□□□□□ -0.48
Igkv3-5A0A140T8M6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv3-5A0A140T8M6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv3-5A0A140T8M6 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv3-5A0A140T8M6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Igkv3-5A0A140T8M6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv3-5A0A140T8M6 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Igkv3-5A0A140T8M6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv3-5A0A140T8M6 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv3-5A0A140T8M6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv3-5A0A140T8M6 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv3-5A0A140T8M6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv3-5A0A140T8M6 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv3-5A0A140T8M6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv3-5A0A140T8M6 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv3-5A0A140T8M6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv3-5A0A140T8M6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC12.04□□□□□ -0.48
Igkv3-5A0A140T8M6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv3-5A0A140T8M6 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv3-5A0A140T8M6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv3-5A0A140T8M6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv3-5A0A140T8M6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv3-5A0A140T8M6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv3-5A0A140T8M6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv3-5A0A140T8M6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv3-5A0A140T8M6 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv3-5A0A140T8M6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv3-5A0A140T8M6 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Igkv3-5A0A140T8M6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv3-5A0A140T8M6 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv3-5A0A140T8M6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv3-5A0A140T8M6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv3-5A0A140T8M6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Igkv3-5A0A140T8M6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igkv3-5A0A140T8M6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igkv3-5A0A140T8M6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igkv3-5A0A140T8M6 Gm6802-201ENSMUST00000167843 1983 ntBASIC12.03□□□□□ -0.48
Igkv3-5A0A140T8M6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igkv3-5A0A140T8M6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igkv3-5A0A140T8M6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Igkv3-5A0A140T8M6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms