Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav9n-2A0A0G2JDP3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC13.89□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC13.89□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Gm8493-201ENSMUST00000196881 489 ntBASIC13.88□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9n-2A0A0G2JDP3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9n-2A0A0G2JDP3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Gm10571-201ENSMUST00000097869 1638 ntBASIC13.87□□□□□ -0.19
Trav9n-2A0A0G2JDP3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC13.87□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9n-2A0A0G2JDP3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC13.87□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Gm45417-201ENSMUST00000209533 758 ntBASIC13.87□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC13.87□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC13.86□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Wdr70-203ENSMUST00000227371 1130 ntBASIC13.85□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav9n-2A0A0G2JDP3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC13.85□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9n-2A0A0G2JDP3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9n-2A0A0G2JDP3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms