Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav4-3A0A0B4J1K1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav4-3A0A0B4J1K1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC13.07□□□□□ -0.32
Trav4-3A0A0B4J1K1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav4-3A0A0B4J1K1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav4-3A0A0B4J1K1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav4-3A0A0B4J1K1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav4-3A0A0B4J1K1 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav4-3A0A0B4J1K1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav4-3A0A0B4J1K1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav4-3A0A0B4J1K1 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav4-3A0A0B4J1K1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav4-3A0A0B4J1K1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4-3A0A0B4J1K1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trav4-3A0A0B4J1K1 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.06□□□□□ -0.32
Trav4-3A0A0B4J1K1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4-3A0A0B4J1K1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4-3A0A0B4J1K1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4-3A0A0B4J1K1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4-3A0A0B4J1K1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4-3A0A0B4J1K1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4-3A0A0B4J1K1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4-3A0A0B4J1K1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC13.06□□□□□ -0.32
Trav4-3A0A0B4J1K1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav4-3A0A0B4J1K1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav4-3A0A0B4J1K1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4-3A0A0B4J1K1 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav4-3A0A0B4J1K1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav4-3A0A0B4J1K1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav4-3A0A0B4J1K1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-3A0A0B4J1K1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-3A0A0B4J1K1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-3A0A0B4J1K1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-3A0A0B4J1K1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-3A0A0B4J1K1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-3A0A0B4J1K1 Gm5953-201ENSMUST00000220644 2616 ntBASIC13.05□□□□□ -0.32
Trav4-3A0A0B4J1K1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav4-3A0A0B4J1K1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Trav4-3A0A0B4J1K1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-3A0A0B4J1K1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-3A0A0B4J1K1 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-3A0A0B4J1K1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-3A0A0B4J1K1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-3A0A0B4J1K1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-3A0A0B4J1K1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-3A0A0B4J1K1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-3A0A0B4J1K1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-3A0A0B4J1K1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-3A0A0B4J1K1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-3A0A0B4J1K1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-3A0A0B4J1K1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Trav4-3A0A0B4J1K1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC13.04□□□□□ -0.32
Trav4-3A0A0B4J1K1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-3A0A0B4J1K1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-3A0A0B4J1K1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-3A0A0B4J1K1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav4-3A0A0B4J1K1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-3A0A0B4J1K1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-3A0A0B4J1K1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-3A0A0B4J1K1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-3A0A0B4J1K1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC13.04□□□□□ -0.32
Trav4-3A0A0B4J1K1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav4-3A0A0B4J1K1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-3A0A0B4J1K1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-3A0A0B4J1K1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-3A0A0B4J1K1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-3A0A0B4J1K1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-3A0A0B4J1K1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-3A0A0B4J1K1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-3A0A0B4J1K1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-3A0A0B4J1K1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-3A0A0B4J1K1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-3A0A0B4J1K1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-3A0A0B4J1K1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav4-3A0A0B4J1K1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-3A0A0B4J1K1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-3A0A0B4J1K1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-3A0A0B4J1K1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-3A0A0B4J1K1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-3A0A0B4J1K1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-3A0A0B4J1K1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-3A0A0B4J1K1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-3A0A0B4J1K1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-3A0A0B4J1K1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-3A0A0B4J1K1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-3A0A0B4J1K1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-3A0A0B4J1K1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav4-3A0A0B4J1K1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
Trav4-3A0A0B4J1K1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-3A0A0B4J1K1 Gm7143-201ENSMUST00000222811 859 ntBASIC13.03□□□□□ -0.32
Trav4-3A0A0B4J1K1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-3A0A0B4J1K1 Gm10620-201ENSMUST00000098379 1332 ntBASIC13.03□□□□□ -0.32
Trav4-3A0A0B4J1K1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-3A0A0B4J1K1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-3A0A0B4J1K1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-3A0A0B4J1K1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-3A0A0B4J1K1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav4-3A0A0B4J1K1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC13.02□□□□□ -0.32
Trav4-3A0A0B4J1K1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trav4-3A0A0B4J1K1 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms