Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.15■□□□□ 0.34
Trbv20A0A0B4J1H5 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv20A0A0B4J1H5 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv20A0A0B4J1H5 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trbv20A0A0B4J1H5 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv20A0A0B4J1H5 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv20A0A0B4J1H5 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv20A0A0B4J1H5 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv20A0A0B4J1H5 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv20A0A0B4J1H5 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trbv20A0A0B4J1H5 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv20A0A0B4J1H5 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.15■□□□□ 0.34
Trbv20A0A0B4J1H5 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv20A0A0B4J1H5 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trbv20A0A0B4J1H5 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Trbv20A0A0B4J1H5 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trbv20A0A0B4J1H5 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trbv20A0A0B4J1H5 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv20A0A0B4J1H5 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv20A0A0B4J1H5 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Trbv20A0A0B4J1H5 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv20A0A0B4J1H5 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.14■□□□□ 0.33
Trbv20A0A0B4J1H5 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.14■□□□□ 0.33
Trbv20A0A0B4J1H5 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv20A0A0B4J1H5 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv20A0A0B4J1H5 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv20A0A0B4J1H5 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv20A0A0B4J1H5 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv20A0A0B4J1H5 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv20A0A0B4J1H5 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv20A0A0B4J1H5 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv20A0A0B4J1H5 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv20A0A0B4J1H5 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv20A0A0B4J1H5 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv20A0A0B4J1H5 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv20A0A0B4J1H5 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trbv20A0A0B4J1H5 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv20A0A0B4J1H5 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trbv20A0A0B4J1H5 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv20A0A0B4J1H5 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Trbv20A0A0B4J1H5 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trbv20A0A0B4J1H5 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv20A0A0B4J1H5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.13■□□□□ 0.33
Trbv20A0A0B4J1H5 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv20A0A0B4J1H5 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.13■□□□□ 0.33
Trbv20A0A0B4J1H5 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv20A0A0B4J1H5 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv20A0A0B4J1H5 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv20A0A0B4J1H5 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv20A0A0B4J1H5 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv20A0A0B4J1H5 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv20A0A0B4J1H5 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv20A0A0B4J1H5 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv20A0A0B4J1H5 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
Trbv20A0A0B4J1H5 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv20A0A0B4J1H5 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv20A0A0B4J1H5 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv20A0A0B4J1H5 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trbv20A0A0B4J1H5 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv20A0A0B4J1H5 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv20A0A0B4J1H5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv20A0A0B4J1H5 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv20A0A0B4J1H5 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trbv20A0A0B4J1H5 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv20A0A0B4J1H5 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv20A0A0B4J1H5 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv20A0A0B4J1H5 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv20A0A0B4J1H5 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv20A0A0B4J1H5 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv20A0A0B4J1H5 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Trbv20A0A0B4J1H5 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv20A0A0B4J1H5 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.11■□□□□ 0.33
Trbv20A0A0B4J1H5 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.11■□□□□ 0.33
Trbv20A0A0B4J1H5 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv20A0A0B4J1H5 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv20A0A0B4J1H5 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv20A0A0B4J1H5 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.11■□□□□ 0.33
Trbv20A0A0B4J1H5 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.11■□□□□ 0.33
Trbv20A0A0B4J1H5 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv20A0A0B4J1H5 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Trbv20A0A0B4J1H5 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv20A0A0B4J1H5 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv20A0A0B4J1H5 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.1■□□□□ 0.33
Trbv20A0A0B4J1H5 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv20A0A0B4J1H5 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
Trbv20A0A0B4J1H5 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trbv20A0A0B4J1H5 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv20A0A0B4J1H5 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv20A0A0B4J1H5 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trbv20A0A0B4J1H5 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv20A0A0B4J1H5 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv20A0A0B4J1H5 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv20A0A0B4J1H5 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.09■□□□□ 0.33
Trbv20A0A0B4J1H5 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv20A0A0B4J1H5 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.09■□□□□ 0.33
Trbv20A0A0B4J1H5 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.09■□□□□ 0.33
Trbv20A0A0B4J1H5 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trbv20A0A0B4J1H5 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv20A0A0B4J1H5 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv20A0A0B4J1H5 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms