Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trbv19A0A0B4J1H4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv19A0A0B4J1H4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv19A0A0B4J1H4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv19A0A0B4J1H4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv19A0A0B4J1H4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv19A0A0B4J1H4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trbv19A0A0B4J1H4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv19A0A0B4J1H4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv19A0A0B4J1H4 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv19A0A0B4J1H4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trbv19A0A0B4J1H4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv19A0A0B4J1H4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trbv19A0A0B4J1H4 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.32■□□□□ 0.04
Trbv19A0A0B4J1H4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv19A0A0B4J1H4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv19A0A0B4J1H4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv19A0A0B4J1H4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.32■□□□□ 0.04
Trbv19A0A0B4J1H4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv19A0A0B4J1H4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv19A0A0B4J1H4 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv19A0A0B4J1H4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv19A0A0B4J1H4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv19A0A0B4J1H4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv19A0A0B4J1H4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trbv19A0A0B4J1H4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv19A0A0B4J1H4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv19A0A0B4J1H4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv19A0A0B4J1H4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.31■□□□□ 0.04
Trbv19A0A0B4J1H4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv19A0A0B4J1H4 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.31■□□□□ 0.04
Trbv19A0A0B4J1H4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv19A0A0B4J1H4 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.31■□□□□ 0.04
Trbv19A0A0B4J1H4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv19A0A0B4J1H4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv19A0A0B4J1H4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv19A0A0B4J1H4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv19A0A0B4J1H4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trbv19A0A0B4J1H4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trbv19A0A0B4J1H4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.31■□□□□ 0.04
Trbv19A0A0B4J1H4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv19A0A0B4J1H4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.3■□□□□ 0.04
Trbv19A0A0B4J1H4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC15.3■□□□□ 0.04
Trbv19A0A0B4J1H4 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv19A0A0B4J1H4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
Trbv19A0A0B4J1H4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv19A0A0B4J1H4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv19A0A0B4J1H4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv19A0A0B4J1H4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv19A0A0B4J1H4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv19A0A0B4J1H4 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv19A0A0B4J1H4 Gm13241-201ENSMUST00000094493 780 ntBASIC15.3■□□□□ 0.04
Trbv19A0A0B4J1H4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv19A0A0B4J1H4 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv19A0A0B4J1H4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv19A0A0B4J1H4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv19A0A0B4J1H4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv19A0A0B4J1H4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv19A0A0B4J1H4 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv19A0A0B4J1H4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv19A0A0B4J1H4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv19A0A0B4J1H4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv19A0A0B4J1H4 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv19A0A0B4J1H4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv19A0A0B4J1H4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv19A0A0B4J1H4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv19A0A0B4J1H4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv19A0A0B4J1H4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv19A0A0B4J1H4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv19A0A0B4J1H4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv19A0A0B4J1H4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv19A0A0B4J1H4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv19A0A0B4J1H4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trbv19A0A0B4J1H4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv19A0A0B4J1H4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trbv19A0A0B4J1H4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Trbv19A0A0B4J1H4 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv19A0A0B4J1H4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv19A0A0B4J1H4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv19A0A0B4J1H4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv19A0A0B4J1H4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv19A0A0B4J1H4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trbv19A0A0B4J1H4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv19A0A0B4J1H4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Trbv19A0A0B4J1H4 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv19A0A0B4J1H4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trbv19A0A0B4J1H4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv19A0A0B4J1H4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv19A0A0B4J1H4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv19A0A0B4J1H4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv19A0A0B4J1H4 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trbv19A0A0B4J1H4 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trbv19A0A0B4J1H4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv19A0A0B4J1H4 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.27■□□□□ 0.04
Trbv19A0A0B4J1H4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv19A0A0B4J1H4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv19A0A0B4J1H4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv19A0A0B4J1H4 Gm12251-201ENSMUST00000117893 792 ntBASIC15.27■□□□□ 0.04
Trbv19A0A0B4J1H4 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC15.27■□□□□ 0.04
Trbv19A0A0B4J1H4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms