Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv13-3A0A0B4J1H2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.92□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.92□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.92□□□□□ -0.02
Trbv13-3A0A0B4J1H2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.92□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.9□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.9□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.9□□□□□ -0.02
Trbv13-3A0A0B4J1H2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trbv13-3A0A0B4J1H2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.9□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.9□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.9□□□□□ -0.02
Trbv13-3A0A0B4J1H2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv13-3A0A0B4J1H2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC14.89□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.89□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv13-3A0A0B4J1H2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC14.88□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms