Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sirpb1aA0A0A6YYP6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Gm14117-201ENSMUST00000122417 843 ntBASIC18.1■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Gm7417-201ENSMUST00000192950 473 ntBASIC18.1■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sirpb1aA0A0A6YYP6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sirpb1aA0A0A6YYP6 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.08■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Sirpb1aA0A0A6YYP6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sirpb1aA0A0A6YYP6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.08■□□□□ 0.48
Sirpb1aA0A0A6YYP6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Gm45102-201ENSMUST00000207427 857 ntBASIC18.08■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.07■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sirpb1aA0A0A6YYP6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.07■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sirpb1aA0A0A6YYP6 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.06■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.06■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.05■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sirpb1aA0A0A6YYP6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.05■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sirpb1aA0A0A6YYP6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.05■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sirpb1aA0A0A6YYP6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms