Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv3A0A0A6YYE2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trbv3A0A0A6YYE2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv3A0A0A6YYE2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Trbv3A0A0A6YYE2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trbv3A0A0A6YYE2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv3A0A0A6YYE2 Gm43530-201ENSMUST00000195920 274 ntBASIC14.76□□□□□ -0.05
Trbv3A0A0A6YYE2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv3A0A0A6YYE2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv3A0A0A6YYE2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv3A0A0A6YYE2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv3A0A0A6YYE2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv3A0A0A6YYE2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv3A0A0A6YYE2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv3A0A0A6YYE2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv3A0A0A6YYE2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv3A0A0A6YYE2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv3A0A0A6YYE2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv3A0A0A6YYE2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv3A0A0A6YYE2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv3A0A0A6YYE2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv3A0A0A6YYE2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trbv3A0A0A6YYE2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv3A0A0A6YYE2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv3A0A0A6YYE2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trbv3A0A0A6YYE2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv3A0A0A6YYE2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv3A0A0A6YYE2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv3A0A0A6YYE2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv3A0A0A6YYE2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv3A0A0A6YYE2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.75□□□□□ -0.05
Trbv3A0A0A6YYE2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv3A0A0A6YYE2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv3A0A0A6YYE2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv3A0A0A6YYE2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trbv3A0A0A6YYE2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv3A0A0A6YYE2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.74□□□□□ -0.05
Trbv3A0A0A6YYE2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv3A0A0A6YYE2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv3A0A0A6YYE2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv3A0A0A6YYE2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Trbv3A0A0A6YYE2 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.74□□□□□ -0.05
Trbv3A0A0A6YYE2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv3A0A0A6YYE2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv3A0A0A6YYE2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv3A0A0A6YYE2 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.74□□□□□ -0.05
Trbv3A0A0A6YYE2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv3A0A0A6YYE2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv3A0A0A6YYE2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv3A0A0A6YYE2 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.73□□□□□ -0.05
Trbv3A0A0A6YYE2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv3A0A0A6YYE2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv3A0A0A6YYE2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv3A0A0A6YYE2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv3A0A0A6YYE2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv3A0A0A6YYE2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.73□□□□□ -0.05
Trbv3A0A0A6YYE2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC14.73□□□□□ -0.05
Trbv3A0A0A6YYE2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC14.73□□□□□ -0.05
Trbv3A0A0A6YYE2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv3A0A0A6YYE2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv3A0A0A6YYE2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.73□□□□□ -0.05
Trbv3A0A0A6YYE2 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.73□□□□□ -0.05
Trbv3A0A0A6YYE2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv3A0A0A6YYE2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trbv3A0A0A6YYE2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv3A0A0A6YYE2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv3A0A0A6YYE2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv3A0A0A6YYE2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.72□□□□□ -0.05
Trbv3A0A0A6YYE2 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.72□□□□□ -0.05
Trbv3A0A0A6YYE2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv3A0A0A6YYE2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv3A0A0A6YYE2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv3A0A0A6YYE2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv3A0A0A6YYE2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC14.72□□□□□ -0.05
Trbv3A0A0A6YYE2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv3A0A0A6YYE2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv3A0A0A6YYE2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv3A0A0A6YYE2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv3A0A0A6YYE2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv3A0A0A6YYE2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv3A0A0A6YYE2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv3A0A0A6YYE2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv3A0A0A6YYE2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv3A0A0A6YYE2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv3A0A0A6YYE2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv3A0A0A6YYE2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv3A0A0A6YYE2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv3A0A0A6YYE2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv3A0A0A6YYE2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv3A0A0A6YYE2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv3A0A0A6YYE2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.71□□□□□ -0.05
Trbv3A0A0A6YYE2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv3A0A0A6YYE2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv3A0A0A6YYE2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv3A0A0A6YYE2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.06
Trbv3A0A0A6YYE2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trbv3A0A0A6YYE2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trbv3A0A0A6YYE2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.71□□□□□ -0.06
Trbv3A0A0A6YYE2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trbv3A0A0A6YYE2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms