Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav6-5A0A075B6B5 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav6-5A0A075B6B5 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-5A0A075B6B5 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-5A0A075B6B5 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-5A0A075B6B5 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-5A0A075B6B5 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav6-5A0A075B6B5 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav6-5A0A075B6B5 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trav6-5A0A075B6B5 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav6-5A0A075B6B5 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav6-5A0A075B6B5 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav6-5A0A075B6B5 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav6-5A0A075B6B5 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Trav6-5A0A075B6B5 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trav6-5A0A075B6B5 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.83□□□□□ -0.04
Trav6-5A0A075B6B5 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-5A0A075B6B5 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav6-5A0A075B6B5 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-5A0A075B6B5 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav6-5A0A075B6B5 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-5A0A075B6B5 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trav6-5A0A075B6B5 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.83□□□□□ -0.04
Trav6-5A0A075B6B5 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-5A0A075B6B5 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-5A0A075B6B5 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-5A0A075B6B5 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-5A0A075B6B5 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.82□□□□□ -0.04
Trav6-5A0A075B6B5 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-5A0A075B6B5 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-5A0A075B6B5 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-5A0A075B6B5 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav6-5A0A075B6B5 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-5A0A075B6B5 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-5A0A075B6B5 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-5A0A075B6B5 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.82□□□□□ -0.04
Trav6-5A0A075B6B5 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-5A0A075B6B5 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trav6-5A0A075B6B5 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-5A0A075B6B5 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-5A0A075B6B5 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav6-5A0A075B6B5 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav6-5A0A075B6B5 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-5A0A075B6B5 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-5A0A075B6B5 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.82□□□□□ -0.04
Trav6-5A0A075B6B5 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-5A0A075B6B5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-5A0A075B6B5 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-5A0A075B6B5 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-5A0A075B6B5 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-5A0A075B6B5 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-5A0A075B6B5 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-5A0A075B6B5 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-5A0A075B6B5 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-5A0A075B6B5 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-5A0A075B6B5 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav6-5A0A075B6B5 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-5A0A075B6B5 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav6-5A0A075B6B5 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-5A0A075B6B5 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-5A0A075B6B5 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-5A0A075B6B5 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-5A0A075B6B5 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav6-5A0A075B6B5 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav6-5A0A075B6B5 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-5A0A075B6B5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-5A0A075B6B5 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-5A0A075B6B5 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-5A0A075B6B5 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-5A0A075B6B5 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-5A0A075B6B5 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-5A0A075B6B5 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-5A0A075B6B5 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-5A0A075B6B5 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-5A0A075B6B5 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-5A0A075B6B5 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav6-5A0A075B6B5 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-5A0A075B6B5 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.8□□□□□ -0.04
Trav6-5A0A075B6B5 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-5A0A075B6B5 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-5A0A075B6B5 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-5A0A075B6B5 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-5A0A075B6B5 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-5A0A075B6B5 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-5A0A075B6B5 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-5A0A075B6B5 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.8□□□□□ -0.04
Trav6-5A0A075B6B5 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-5A0A075B6B5 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-5A0A075B6B5 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-5A0A075B6B5 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-5A0A075B6B5 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-5A0A075B6B5 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-5A0A075B6B5 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC14.79□□□□□ -0.04
Trav6-5A0A075B6B5 Gm43530-201ENSMUST00000195920 274 ntBASIC14.79□□□□□ -0.04
Trav6-5A0A075B6B5 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.79□□□□□ -0.04
Trav6-5A0A075B6B5 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-5A0A075B6B5 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-5A0A075B6B5 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav6-5A0A075B6B5 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-5A0A075B6B5 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms