Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav16A0A075B653 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC14.77□□□□□ -0.05
Trav16A0A075B653 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC14.77□□□□□ -0.05
Trav16A0A075B653 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC14.77□□□□□ -0.05
Trav16A0A075B653 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav16A0A075B653 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
Trav16A0A075B653 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC14.77□□□□□ -0.05
Trav16A0A075B653 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav16A0A075B653 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav16A0A075B653 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav16A0A075B653 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav16A0A075B653 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav16A0A075B653 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav16A0A075B653 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.76□□□□□ -0.05
Trav16A0A075B653 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav16A0A075B653 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav16A0A075B653 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav16A0A075B653 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav16A0A075B653 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav16A0A075B653 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav16A0A075B653 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav16A0A075B653 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav16A0A075B653 Gm43566-201ENSMUST00000196851 808 ntBASIC14.76□□□□□ -0.05
Trav16A0A075B653 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav16A0A075B653 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav16A0A075B653 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav16A0A075B653 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav16A0A075B653 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav16A0A075B653 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav16A0A075B653 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trav16A0A075B653 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav16A0A075B653 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav16A0A075B653 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16A0A075B653 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16A0A075B653 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16A0A075B653 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16A0A075B653 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16A0A075B653 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.75□□□□□ -0.05
Trav16A0A075B653 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16A0A075B653 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav16A0A075B653 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16A0A075B653 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16A0A075B653 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16A0A075B653 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16A0A075B653 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav16A0A075B653 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16A0A075B653 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC14.75□□□□□ -0.05
Trav16A0A075B653 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16A0A075B653 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16A0A075B653 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16A0A075B653 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16A0A075B653 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav16A0A075B653 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav16A0A075B653 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16A0A075B653 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16A0A075B653 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16A0A075B653 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16A0A075B653 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16A0A075B653 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Trav16A0A075B653 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav16A0A075B653 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16A0A075B653 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16A0A075B653 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16A0A075B653 Gm10232-201ENSMUST00000089221 720 ntBASIC14.74□□□□□ -0.05
Trav16A0A075B653 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16A0A075B653 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16A0A075B653 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16A0A075B653 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16A0A075B653 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16A0A075B653 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16A0A075B653 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16A0A075B653 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav16A0A075B653 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav16A0A075B653 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16A0A075B653 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16A0A075B653 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16A0A075B653 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16A0A075B653 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16A0A075B653 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16A0A075B653 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav16A0A075B653 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16A0A075B653 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16A0A075B653 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav16A0A075B653 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16A0A075B653 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16A0A075B653 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16A0A075B653 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16A0A075B653 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16A0A075B653 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16A0A075B653 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16A0A075B653 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.73□□□□□ -0.05
Trav16A0A075B653 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16A0A075B653 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Trav16A0A075B653 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16A0A075B653 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16A0A075B653 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16A0A075B653 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Trav16A0A075B653 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16A0A075B653 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16A0A075B653 Gm13238-201ENSMUST00000117655 780 ntBASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms