Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Trav8n-2A0A075B633 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav8n-2A0A075B633 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav8n-2A0A075B633 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav8n-2A0A075B633 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.58■□□□□ 0.4
Trav8n-2A0A075B633 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav8n-2A0A075B633 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav8n-2A0A075B633 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.58■□□□□ 0.4
Trav8n-2A0A075B633 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.58■□□□□ 0.4
Trav8n-2A0A075B633 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav8n-2A0A075B633 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.57■□□□□ 0.4
Trav8n-2A0A075B633 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav8n-2A0A075B633 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trav8n-2A0A075B633 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.57■□□□□ 0.4
Trav8n-2A0A075B633 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.57■□□□□ 0.4
Trav8n-2A0A075B633 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.57■□□□□ 0.4
Trav8n-2A0A075B633 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.57■□□□□ 0.4
Trav8n-2A0A075B633 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Trav8n-2A0A075B633 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav8n-2A0A075B633 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav8n-2A0A075B633 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav8n-2A0A075B633 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav8n-2A0A075B633 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trav8n-2A0A075B633 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav8n-2A0A075B633 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trav8n-2A0A075B633 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav8n-2A0A075B633 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav8n-2A0A075B633 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav8n-2A0A075B633 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav8n-2A0A075B633 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav8n-2A0A075B633 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.56■□□□□ 0.4
Trav8n-2A0A075B633 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trav8n-2A0A075B633 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trav8n-2A0A075B633 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav8n-2A0A075B633 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav8n-2A0A075B633 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.55■□□□□ 0.4
Trav8n-2A0A075B633 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav8n-2A0A075B633 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trav8n-2A0A075B633 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav8n-2A0A075B633 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav8n-2A0A075B633 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trav8n-2A0A075B633 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav8n-2A0A075B633 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav8n-2A0A075B633 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav8n-2A0A075B633 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav8n-2A0A075B633 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav8n-2A0A075B633 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.54■□□□□ 0.4
Trav8n-2A0A075B633 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Trav8n-2A0A075B633 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Trav8n-2A0A075B633 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trav8n-2A0A075B633 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav8n-2A0A075B633 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav8n-2A0A075B633 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trav8n-2A0A075B633 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.53■□□□□ 0.4
Trav8n-2A0A075B633 Gm12896-201ENSMUST00000118430 226 ntBASIC17.53■□□□□ 0.4
Trav8n-2A0A075B633 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.53■□□□□ 0.4
Trav8n-2A0A075B633 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.53■□□□□ 0.4
Trav8n-2A0A075B633 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.53■□□□□ 0.4
Trav8n-2A0A075B633 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav8n-2A0A075B633 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav8n-2A0A075B633 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trav8n-2A0A075B633 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav8n-2A0A075B633 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav8n-2A0A075B633 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trav8n-2A0A075B633 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav8n-2A0A075B633 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav8n-2A0A075B633 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Trav8n-2A0A075B633 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav8n-2A0A075B633 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Trav8n-2A0A075B633 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.52■□□□□ 0.4
Trav8n-2A0A075B633 Mir6982-201ENSMUST00000184354 68 ntBASIC17.52■□□□□ 0.4
Trav8n-2A0A075B633 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav8n-2A0A075B633 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav8n-2A0A075B633 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trav8n-2A0A075B633 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
Trav8n-2A0A075B633 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav8n-2A0A075B633 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav8n-2A0A075B633 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav8n-2A0A075B633 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Trav8n-2A0A075B633 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.52■□□□□ 0.39
Trav8n-2A0A075B633 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.51■□□□□ 0.39
Trav8n-2A0A075B633 Gm27275-201ENSMUST00000184318 272 ntBASIC17.51■□□□□ 0.39
Trav8n-2A0A075B633 Gm2559-201ENSMUST00000201323 363 ntBASIC17.51■□□□□ 0.39
Trav8n-2A0A075B633 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.51■□□□□ 0.39
Trav8n-2A0A075B633 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav8n-2A0A075B633 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.51■□□□□ 0.39
Trav8n-2A0A075B633 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav8n-2A0A075B633 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trav8n-2A0A075B633 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav8n-2A0A075B633 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav8n-2A0A075B633 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav8n-2A0A075B633 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav8n-2A0A075B633 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav8n-2A0A075B633 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Trav8n-2A0A075B633 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav8n-2A0A075B633 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trav8n-2A0A075B633 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trav8n-2A0A075B633 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.5■□□□□ 0.39
Trav8n-2A0A075B633 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav8n-2A0A075B633 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms