Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.28■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Gm15820-201ENSMUST00000201566 728 ntBASIC16.28■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.28■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.28■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.27■□□□□ 0.2
Trav15d-1-dv6d-1A0A075B624 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.26■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.25■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.24■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.24■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.23■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.23■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.23■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 BC021767-201ENSMUST00000126387 1716 ntBASIC16.22■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.22■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.22■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms