Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.82■□□□□ 0.44
Trav1A0A075B5Z4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav1A0A075B5Z4 Mir7075-201ENSMUST00000184187 82 ntBASIC17.82■□□□□ 0.44
Trav1A0A075B5Z4 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.82■□□□□ 0.44
Trav1A0A075B5Z4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav1A0A075B5Z4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav1A0A075B5Z4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav1A0A075B5Z4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav1A0A075B5Z4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav1A0A075B5Z4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav1A0A075B5Z4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trav1A0A075B5Z4 Gm43173-201ENSMUST00000202246 593 ntBASIC17.81■□□□□ 0.44
Trav1A0A075B5Z4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.81■□□□□ 0.44
Trav1A0A075B5Z4 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.81■□□□□ 0.44
Trav1A0A075B5Z4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav1A0A075B5Z4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav1A0A075B5Z4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav1A0A075B5Z4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav1A0A075B5Z4 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav1A0A075B5Z4 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav1A0A075B5Z4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav1A0A075B5Z4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav1A0A075B5Z4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Trav1A0A075B5Z4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Trav1A0A075B5Z4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.8■□□□□ 0.44
Trav1A0A075B5Z4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav1A0A075B5Z4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Trav1A0A075B5Z4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.8■□□□□ 0.44
Trav1A0A075B5Z4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav1A0A075B5Z4 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav1A0A075B5Z4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav1A0A075B5Z4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.8■□□□□ 0.44
Trav1A0A075B5Z4 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.8■□□□□ 0.44
Trav1A0A075B5Z4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trav1A0A075B5Z4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav1A0A075B5Z4 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav1A0A075B5Z4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav1A0A075B5Z4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav1A0A075B5Z4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav1A0A075B5Z4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav1A0A075B5Z4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trav1A0A075B5Z4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav1A0A075B5Z4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav1A0A075B5Z4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav1A0A075B5Z4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav1A0A075B5Z4 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Trav1A0A075B5Z4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav1A0A075B5Z4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav1A0A075B5Z4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav1A0A075B5Z4 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav1A0A075B5Z4 Gm11421-201ENSMUST00000122124 294 ntBASIC17.78■□□□□ 0.44
Trav1A0A075B5Z4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.78■□□□□ 0.44
Trav1A0A075B5Z4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav1A0A075B5Z4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav1A0A075B5Z4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trav1A0A075B5Z4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav1A0A075B5Z4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav1A0A075B5Z4 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trav1A0A075B5Z4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav1A0A075B5Z4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav1A0A075B5Z4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav1A0A075B5Z4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav1A0A075B5Z4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav1A0A075B5Z4 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav1A0A075B5Z4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Trav1A0A075B5Z4 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Trav1A0A075B5Z4 Gm8493-201ENSMUST00000196881 489 ntBASIC17.77■□□□□ 0.44
Trav1A0A075B5Z4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav1A0A075B5Z4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav1A0A075B5Z4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav1A0A075B5Z4 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav1A0A075B5Z4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav1A0A075B5Z4 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Trav1A0A075B5Z4 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
Trav1A0A075B5Z4 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.76■□□□□ 0.43
Trav1A0A075B5Z4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav1A0A075B5Z4 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.76■□□□□ 0.43
Trav1A0A075B5Z4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav1A0A075B5Z4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav1A0A075B5Z4 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav1A0A075B5Z4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav1A0A075B5Z4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav1A0A075B5Z4 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav1A0A075B5Z4 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav1A0A075B5Z4 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav1A0A075B5Z4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Trav1A0A075B5Z4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.76■□□□□ 0.43
Trav1A0A075B5Z4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav1A0A075B5Z4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav1A0A075B5Z4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav1A0A075B5Z4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav1A0A075B5Z4 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trav1A0A075B5Z4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav1A0A075B5Z4 Gm12821-201ENSMUST00000120022 600 ntBASIC17.75■□□□□ 0.43
Trav1A0A075B5Z4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Trav1A0A075B5Z4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav1A0A075B5Z4 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trav1A0A075B5Z4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trav1A0A075B5Z4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Trav1A0A075B5Z4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms