Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Hdac6Q9Z2V5 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC33.19■■■□□ 2.9
Hdac6Q9Z2V5 Gm5987-201ENSMUST00000196433 1151 ntBASIC33.18■■■□□ 2.9
Hdac6Q9Z2V5 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
Hdac6Q9Z2V5 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
Hdac6Q9Z2V5 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC33.14■■■□□ 2.9
Hdac6Q9Z2V5 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC33.14■■■□□ 2.9
Hdac6Q9Z2V5 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC33.11■■■□□ 2.89
Hdac6Q9Z2V5 Gm9939-201ENSMUST00000067161 1154 ntBASIC33.08■■■□□ 2.89
Hdac6Q9Z2V5 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Hdac6Q9Z2V5 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC33.04■■■□□ 2.88
Hdac6Q9Z2V5 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC33.03■■■□□ 2.88
Hdac6Q9Z2V5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Hdac6Q9Z2V5 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Hdac6Q9Z2V5 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Hdac6Q9Z2V5 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC33.02■■■□□ 2.88
Hdac6Q9Z2V5 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
Hdac6Q9Z2V5 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC33■■■□□ 2.87
Hdac6Q9Z2V5 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC32.98■■■□□ 2.87
Hdac6Q9Z2V5 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Hdac6Q9Z2V5 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Hdac6Q9Z2V5 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Hdac6Q9Z2V5 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Hdac6Q9Z2V5 Gm8503-201ENSMUST00000118131 455 ntBASIC32.97■■■□□ 2.87
Hdac6Q9Z2V5 Gm43863-201ENSMUST00000203822 1192 ntBASIC32.97■■■□□ 2.87
Hdac6Q9Z2V5 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC32.97■■■□□ 2.87
Hdac6Q9Z2V5 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
Hdac6Q9Z2V5 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
Hdac6Q9Z2V5 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Hdac6Q9Z2V5 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC32.93■■■□□ 2.86
Hdac6Q9Z2V5 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC32.91■■■□□ 2.86
Hdac6Q9Z2V5 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Hdac6Q9Z2V5 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
Hdac6Q9Z2V5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC32.88■■■□□ 2.85
Hdac6Q9Z2V5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Hdac6Q9Z2V5 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC32.87■■■□□ 2.85
Hdac6Q9Z2V5 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Hdac6Q9Z2V5 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Hdac6Q9Z2V5 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
Hdac6Q9Z2V5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC32.83■■■□□ 2.85
Hdac6Q9Z2V5 Gm6821-201ENSMUST00000107540 542 ntBASIC32.82■■■□□ 2.84
Hdac6Q9Z2V5 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Hdac6Q9Z2V5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC32.81■■■□□ 2.84
Hdac6Q9Z2V5 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC32.8■■■□□ 2.84
Hdac6Q9Z2V5 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC32.78■■■□□ 2.84
Hdac6Q9Z2V5 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC32.77■■■□□ 2.84
Hdac6Q9Z2V5 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC32.77■■■□□ 2.84
Hdac6Q9Z2V5 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC32.77■■■□□ 2.84
Hdac6Q9Z2V5 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Hdac6Q9Z2V5 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
Hdac6Q9Z2V5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Hdac6Q9Z2V5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC32.73■■■□□ 2.83
Hdac6Q9Z2V5 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
Hdac6Q9Z2V5 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Hdac6Q9Z2V5 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Hdac6Q9Z2V5 AC157572.2-201ENSMUST00000226970 908 ntBASIC32.69■■■□□ 2.82
Hdac6Q9Z2V5 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC32.67■■■□□ 2.82
Hdac6Q9Z2V5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC32.66■■■□□ 2.82
Hdac6Q9Z2V5 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
Hdac6Q9Z2V5 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC32.65■■■□□ 2.82
Hdac6Q9Z2V5 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Hdac6Q9Z2V5 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Hdac6Q9Z2V5 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Hdac6Q9Z2V5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC32.62■■■□□ 2.81
Hdac6Q9Z2V5 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Hdac6Q9Z2V5 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Hdac6Q9Z2V5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Hdac6Q9Z2V5 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
Hdac6Q9Z2V5 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
Hdac6Q9Z2V5 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC32.55■■■□□ 2.8
Hdac6Q9Z2V5 Gm42809-201ENSMUST00000198429 1138 ntBASIC32.55■■■□□ 2.8
Hdac6Q9Z2V5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC32.54■■■□□ 2.8
Hdac6Q9Z2V5 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC32.54■■■□□ 2.8
Hdac6Q9Z2V5 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Hdac6Q9Z2V5 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC32.53■■■□□ 2.8
Hdac6Q9Z2V5 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC32.53■■■□□ 2.8
Hdac6Q9Z2V5 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Hdac6Q9Z2V5 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Hdac6Q9Z2V5 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC32.51■■■□□ 2.79
Hdac6Q9Z2V5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC32.5■■■□□ 2.79
Hdac6Q9Z2V5 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC32.5■■■□□ 2.79
Hdac6Q9Z2V5 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Hdac6Q9Z2V5 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Hdac6Q9Z2V5 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC32.47■■■□□ 2.79
Hdac6Q9Z2V5 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC32.46■■■□□ 2.79
Hdac6Q9Z2V5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Hdac6Q9Z2V5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
Hdac6Q9Z2V5 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.79
Hdac6Q9Z2V5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC32.45■■■□□ 2.78
Hdac6Q9Z2V5 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC32.44■■■□□ 2.78
Hdac6Q9Z2V5 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Hdac6Q9Z2V5 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC32.43■■■□□ 2.78
Hdac6Q9Z2V5 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC32.39■■■□□ 2.78
Hdac6Q9Z2V5 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
Hdac6Q9Z2V5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
Hdac6Q9Z2V5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC32.36■■■□□ 2.77
Hdac6Q9Z2V5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Hdac6Q9Z2V5 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC32.36■■■□□ 2.77
Hdac6Q9Z2V5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
Hdac6Q9Z2V5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms