Protein–RNA interactions for Protein: Q9D8B4

Ndufa11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa11Q9D8B4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Ndufa11Q9D8B4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.72■■□□□ 1.23
Ndufa11Q9D8B4 Gm6821-201ENSMUST00000107540 542 ntBASIC22.7■■□□□ 1.22
Ndufa11Q9D8B4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
Ndufa11Q9D8B4 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Ndufa11Q9D8B4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ndufa11Q9D8B4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ndufa11Q9D8B4 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.67■■□□□ 1.22
Ndufa11Q9D8B4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.66■■□□□ 1.22
Ndufa11Q9D8B4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ndufa11Q9D8B4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Ndufa11Q9D8B4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ndufa11Q9D8B4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.63■■□□□ 1.21
Ndufa11Q9D8B4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ndufa11Q9D8B4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ndufa11Q9D8B4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ndufa11Q9D8B4 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.62■■□□□ 1.21
Ndufa11Q9D8B4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.59■■□□□ 1.21
Ndufa11Q9D8B4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ndufa11Q9D8B4 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.2
Ndufa11Q9D8B4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ndufa11Q9D8B4 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ndufa11Q9D8B4 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ndufa11Q9D8B4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
Ndufa11Q9D8B4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Ndufa11Q9D8B4 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ndufa11Q9D8B4 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ndufa11Q9D8B4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ndufa11Q9D8B4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Ndufa11Q9D8B4 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
Ndufa11Q9D8B4 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.51■■□□□ 1.19
Ndufa11Q9D8B4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ndufa11Q9D8B4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Ndufa11Q9D8B4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ndufa11Q9D8B4 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.47■■□□□ 1.19
Ndufa11Q9D8B4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ndufa11Q9D8B4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Ndufa11Q9D8B4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Ndufa11Q9D8B4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Ndufa11Q9D8B4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ndufa11Q9D8B4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ndufa11Q9D8B4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.42■■□□□ 1.18
Ndufa11Q9D8B4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ndufa11Q9D8B4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Ndufa11Q9D8B4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ndufa11Q9D8B4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.4■■□□□ 1.18
Ndufa11Q9D8B4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.4■■□□□ 1.18
Ndufa11Q9D8B4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ndufa11Q9D8B4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ndufa11Q9D8B4 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.39■■□□□ 1.17
Ndufa11Q9D8B4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ndufa11Q9D8B4 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ndufa11Q9D8B4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ndufa11Q9D8B4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ndufa11Q9D8B4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ndufa11Q9D8B4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Ndufa11Q9D8B4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Ndufa11Q9D8B4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Ndufa11Q9D8B4 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.35■■□□□ 1.17
Ndufa11Q9D8B4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.35■■□□□ 1.17
Ndufa11Q9D8B4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Ndufa11Q9D8B4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ndufa11Q9D8B4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
Ndufa11Q9D8B4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ndufa11Q9D8B4 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.31■■□□□ 1.16
Ndufa11Q9D8B4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ndufa11Q9D8B4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ndufa11Q9D8B4 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ndufa11Q9D8B4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Ndufa11Q9D8B4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.29■■□□□ 1.16
Ndufa11Q9D8B4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ndufa11Q9D8B4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Ndufa11Q9D8B4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ndufa11Q9D8B4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Ndufa11Q9D8B4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ndufa11Q9D8B4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.26■■□□□ 1.15
Ndufa11Q9D8B4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ndufa11Q9D8B4 Nkain2-201ENSMUST00000092602 558 ntBASIC22.25■■□□□ 1.15
Ndufa11Q9D8B4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Ndufa11Q9D8B4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.25■■□□□ 1.15
Ndufa11Q9D8B4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ndufa11Q9D8B4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ndufa11Q9D8B4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.24■■□□□ 1.15
Ndufa11Q9D8B4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ndufa11Q9D8B4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.23■■□□□ 1.15
Ndufa11Q9D8B4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ndufa11Q9D8B4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ndufa11Q9D8B4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ndufa11Q9D8B4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.22■■□□□ 1.15
Ndufa11Q9D8B4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ndufa11Q9D8B4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ndufa11Q9D8B4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ndufa11Q9D8B4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ndufa11Q9D8B4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
Ndufa11Q9D8B4 Gm7432-201ENSMUST00000210343 879 ntBASIC22.19■■□□□ 1.14
Ndufa11Q9D8B4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ndufa11Q9D8B4 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ndufa11Q9D8B4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ndufa11Q9D8B4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.17■■□□□ 1.14
Ndufa11Q9D8B4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms