Protein–RNA interactions for Protein: Q9D6G3

2900055J20Rik, RIKEN cDNA 2900055J20 gene, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
2900055J20RikQ9D6G3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
2900055J20RikQ9D6G3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
2900055J20RikQ9D6G3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
2900055J20RikQ9D6G3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
2900055J20RikQ9D6G3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
2900055J20RikQ9D6G3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.64■□□□□ 0.89
2900055J20RikQ9D6G3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
2900055J20RikQ9D6G3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
2900055J20RikQ9D6G3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
2900055J20RikQ9D6G3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
2900055J20RikQ9D6G3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
2900055J20RikQ9D6G3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
2900055J20RikQ9D6G3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
2900055J20RikQ9D6G3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
2900055J20RikQ9D6G3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
2900055J20RikQ9D6G3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
2900055J20RikQ9D6G3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
2900055J20RikQ9D6G3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
2900055J20RikQ9D6G3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
2900055J20RikQ9D6G3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
2900055J20RikQ9D6G3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.57■□□□□ 0.88
2900055J20RikQ9D6G3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
2900055J20RikQ9D6G3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
2900055J20RikQ9D6G3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
2900055J20RikQ9D6G3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.55■□□□□ 0.88
2900055J20RikQ9D6G3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
2900055J20RikQ9D6G3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
2900055J20RikQ9D6G3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
2900055J20RikQ9D6G3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
2900055J20RikQ9D6G3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.53■□□□□ 0.88
2900055J20RikQ9D6G3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
2900055J20RikQ9D6G3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
2900055J20RikQ9D6G3 Rab21-202ENSMUST00000218831 843 ntBASIC20.5■□□□□ 0.87
2900055J20RikQ9D6G3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
2900055J20RikQ9D6G3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.49■□□□□ 0.87
2900055J20RikQ9D6G3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
2900055J20RikQ9D6G3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
2900055J20RikQ9D6G3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
2900055J20RikQ9D6G3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
2900055J20RikQ9D6G3 Mipep-204ENSMUST00000225043 1548 ntBASIC20.48■□□□□ 0.87
2900055J20RikQ9D6G3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.47■□□□□ 0.87
2900055J20RikQ9D6G3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
2900055J20RikQ9D6G3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
2900055J20RikQ9D6G3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
2900055J20RikQ9D6G3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
2900055J20RikQ9D6G3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
2900055J20RikQ9D6G3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
2900055J20RikQ9D6G3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
2900055J20RikQ9D6G3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.43■□□□□ 0.86
2900055J20RikQ9D6G3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
2900055J20RikQ9D6G3 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.42■□□□□ 0.86
2900055J20RikQ9D6G3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
2900055J20RikQ9D6G3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.42■□□□□ 0.86
2900055J20RikQ9D6G3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
2900055J20RikQ9D6G3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
2900055J20RikQ9D6G3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
2900055J20RikQ9D6G3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
2900055J20RikQ9D6G3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
2900055J20RikQ9D6G3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
2900055J20RikQ9D6G3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.39■□□□□ 0.86
2900055J20RikQ9D6G3 Gm25262-201ENSMUST00000174934 133 ntBASIC20.39■□□□□ 0.85
2900055J20RikQ9D6G3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.37■□□□□ 0.85
2900055J20RikQ9D6G3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
2900055J20RikQ9D6G3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
2900055J20RikQ9D6G3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
2900055J20RikQ9D6G3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
2900055J20RikQ9D6G3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
2900055J20RikQ9D6G3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
2900055J20RikQ9D6G3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.35■□□□□ 0.85
2900055J20RikQ9D6G3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
2900055J20RikQ9D6G3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
2900055J20RikQ9D6G3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
2900055J20RikQ9D6G3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
2900055J20RikQ9D6G3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
2900055J20RikQ9D6G3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
2900055J20RikQ9D6G3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
2900055J20RikQ9D6G3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
2900055J20RikQ9D6G3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
2900055J20RikQ9D6G3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
2900055J20RikQ9D6G3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
2900055J20RikQ9D6G3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
2900055J20RikQ9D6G3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
2900055J20RikQ9D6G3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
2900055J20RikQ9D6G3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
2900055J20RikQ9D6G3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
2900055J20RikQ9D6G3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
2900055J20RikQ9D6G3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
2900055J20RikQ9D6G3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
2900055J20RikQ9D6G3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
2900055J20RikQ9D6G3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
2900055J20RikQ9D6G3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
2900055J20RikQ9D6G3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
2900055J20RikQ9D6G3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
2900055J20RikQ9D6G3 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.24■□□□□ 0.83
2900055J20RikQ9D6G3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
2900055J20RikQ9D6G3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
2900055J20RikQ9D6G3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
2900055J20RikQ9D6G3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
2900055J20RikQ9D6G3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
2900055J20RikQ9D6G3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms