Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Sec61bQ9CQS8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sec61bQ9CQS8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC13.65□□□□□ -0.22
Sec61bQ9CQS8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC13.65□□□□□ -0.22
Sec61bQ9CQS8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61bQ9CQS8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61bQ9CQS8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Sec61bQ9CQS8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61bQ9CQS8 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61bQ9CQS8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61bQ9CQS8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC13.64□□□□□ -0.23
Sec61bQ9CQS8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61bQ9CQS8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61bQ9CQS8 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Sec61bQ9CQS8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61bQ9CQS8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Sec61bQ9CQS8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61bQ9CQS8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61bQ9CQS8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Sec61bQ9CQS8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61bQ9CQS8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61bQ9CQS8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sec61bQ9CQS8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sec61bQ9CQS8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Sec61bQ9CQS8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sec61bQ9CQS8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC13.57□□□□□ -0.24
Sec61bQ9CQS8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Sec61bQ9CQS8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC13.55□□□□□ -0.24
Sec61bQ9CQS8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
Sec61bQ9CQS8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Sec61bQ9CQS8 Gm43863-201ENSMUST00000203822 1192 ntBASIC13.53□□□□□ -0.24
Sec61bQ9CQS8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC13.53□□□□□ -0.24
Sec61bQ9CQS8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61bQ9CQS8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Sec61bQ9CQS8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sec61bQ9CQS8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61bQ9CQS8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61bQ9CQS8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61bQ9CQS8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61bQ9CQS8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61bQ9CQS8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sec61bQ9CQS8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC13.5□□□□□ -0.25
Sec61bQ9CQS8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.5□□□□□ -0.25
Sec61bQ9CQS8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sec61bQ9CQS8 Gm9939-201ENSMUST00000067161 1154 ntBASIC13.49□□□□□ -0.25
Sec61bQ9CQS8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sec61bQ9CQS8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sec61bQ9CQS8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sec61bQ9CQS8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sec61bQ9CQS8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sec61bQ9CQS8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Sec61bQ9CQS8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sec61bQ9CQS8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC13.46□□□□□ -0.25
Sec61bQ9CQS8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sec61bQ9CQS8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sec61bQ9CQS8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC13.46□□□□□ -0.26
Sec61bQ9CQS8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC13.45□□□□□ -0.26
Sec61bQ9CQS8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61bQ9CQS8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61bQ9CQS8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61bQ9CQS8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61bQ9CQS8 Gm6821-201ENSMUST00000107540 542 ntBASIC13.45□□□□□ -0.26
Sec61bQ9CQS8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Sec61bQ9CQS8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61bQ9CQS8 AC157572.2-201ENSMUST00000226970 908 ntBASIC13.45□□□□□ -0.26
Sec61bQ9CQS8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sec61bQ9CQS8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sec61bQ9CQS8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sec61bQ9CQS8 Gm8503-201ENSMUST00000118131 455 ntBASIC13.42□□□□□ -0.26
Sec61bQ9CQS8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sec61bQ9CQS8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sec61bQ9CQS8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61bQ9CQS8 Gm5987-201ENSMUST00000196433 1151 ntBASIC13.41□□□□□ -0.26
Sec61bQ9CQS8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61bQ9CQS8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61bQ9CQS8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61bQ9CQS8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61bQ9CQS8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sec61bQ9CQS8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sec61bQ9CQS8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sec61bQ9CQS8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Sec61bQ9CQS8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sec61bQ9CQS8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61bQ9CQS8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61bQ9CQS8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61bQ9CQS8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61bQ9CQS8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Sec61bQ9CQS8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61bQ9CQS8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61bQ9CQS8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61bQ9CQS8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Sec61bQ9CQS8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sec61bQ9CQS8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sec61bQ9CQS8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sec61bQ9CQS8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sec61bQ9CQS8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC13.36□□□□□ -0.27
Sec61bQ9CQS8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sec61bQ9CQS8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sec61bQ9CQS8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sec61bQ9CQS8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms