Protein–RNA interactions for Protein: Q9CQJ4

Rnf2, E3 ubiquitin-protein ligase RING2, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf2Q9CQJ4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf2Q9CQJ4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.02■□□□□ 0.8
Rnf2Q9CQJ4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rnf2Q9CQJ4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Rnf2Q9CQJ4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20■□□□□ 0.79
Rnf2Q9CQJ4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf2Q9CQJ4 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.99■□□□□ 0.79
Rnf2Q9CQJ4 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.99■□□□□ 0.79
Rnf2Q9CQJ4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf2Q9CQJ4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf2Q9CQJ4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf2Q9CQJ4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf2Q9CQJ4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf2Q9CQJ4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Rnf2Q9CQJ4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf2Q9CQJ4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf2Q9CQJ4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Rnf2Q9CQJ4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
Rnf2Q9CQJ4 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf2Q9CQJ4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf2Q9CQJ4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf2Q9CQJ4 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf2Q9CQJ4 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf2Q9CQJ4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf2Q9CQJ4 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf2Q9CQJ4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf2Q9CQJ4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
Rnf2Q9CQJ4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
Rnf2Q9CQJ4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf2Q9CQJ4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf2Q9CQJ4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf2Q9CQJ4 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf2Q9CQJ4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf2Q9CQJ4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf2Q9CQJ4 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.8■□□□□ 0.76
Rnf2Q9CQJ4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf2Q9CQJ4 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf2Q9CQJ4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf2Q9CQJ4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf2Q9CQJ4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf2Q9CQJ4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rnf2Q9CQJ4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf2Q9CQJ4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf2Q9CQJ4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf2Q9CQJ4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf2Q9CQJ4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf2Q9CQJ4 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf2Q9CQJ4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf2Q9CQJ4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Rnf2Q9CQJ4 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf2Q9CQJ4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf2Q9CQJ4 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf2Q9CQJ4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf2Q9CQJ4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf2Q9CQJ4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf2Q9CQJ4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf2Q9CQJ4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.68■□□□□ 0.74
Rnf2Q9CQJ4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf2Q9CQJ4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Rnf2Q9CQJ4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf2Q9CQJ4 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.66■□□□□ 0.74
Rnf2Q9CQJ4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf2Q9CQJ4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.66■□□□□ 0.74
Rnf2Q9CQJ4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rnf2Q9CQJ4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf2Q9CQJ4 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf2Q9CQJ4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf2Q9CQJ4 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf2Q9CQJ4 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Rnf2Q9CQJ4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf2Q9CQJ4 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf2Q9CQJ4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Rnf2Q9CQJ4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf2Q9CQJ4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf2Q9CQJ4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf2Q9CQJ4 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf2Q9CQJ4 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf2Q9CQJ4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf2Q9CQJ4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf2Q9CQJ4 Amer2-203ENSMUST00000225247 2662 ntBASIC19.61■□□□□ 0.73
Rnf2Q9CQJ4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf2Q9CQJ4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf2Q9CQJ4 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf2Q9CQJ4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Rnf2Q9CQJ4 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Rnf2Q9CQJ4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Rnf2Q9CQJ4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.57■□□□□ 0.72
Rnf2Q9CQJ4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf2Q9CQJ4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf2Q9CQJ4 Gm24804-201ENSMUST00000174982 85 ntBASIC19.57■□□□□ 0.72
Rnf2Q9CQJ4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Rnf2Q9CQJ4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf2Q9CQJ4 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf2Q9CQJ4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf2Q9CQJ4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.55■□□□□ 0.72
Rnf2Q9CQJ4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf2Q9CQJ4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf2Q9CQJ4 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.54■□□□□ 0.72
Rnf2Q9CQJ4 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf2Q9CQJ4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms