Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Trim16Q99PP9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Trim16Q99PP9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.26■■□□□ 1.47
Trim16Q99PP9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Trim16Q99PP9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
Trim16Q99PP9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Trim16Q99PP9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.23■■□□□ 1.47
Trim16Q99PP9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
Trim16Q99PP9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.23■■□□□ 1.47
Trim16Q99PP9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Trim16Q99PP9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Trim16Q99PP9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Trim16Q99PP9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Trim16Q99PP9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Trim16Q99PP9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Trim16Q99PP9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
Trim16Q99PP9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Trim16Q99PP9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.19■■□□□ 1.46
Trim16Q99PP9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Trim16Q99PP9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Trim16Q99PP9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Trim16Q99PP9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Trim16Q99PP9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Trim16Q99PP9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.16■■□□□ 1.46
Trim16Q99PP9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
Trim16Q99PP9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Trim16Q99PP9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Trim16Q99PP9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Trim16Q99PP9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Trim16Q99PP9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Trim16Q99PP9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Trim16Q99PP9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Trim16Q99PP9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.11■■□□□ 1.45
Trim16Q99PP9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Trim16Q99PP9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
Trim16Q99PP9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Trim16Q99PP9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Trim16Q99PP9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC24.1■■□□□ 1.45
Trim16Q99PP9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.1■■□□□ 1.45
Trim16Q99PP9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Trim16Q99PP9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.08■■□□□ 1.45
Trim16Q99PP9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Trim16Q99PP9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Trim16Q99PP9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Trim16Q99PP9 Zfp131-205ENSMUST00000223812 663 ntBASIC24.06■■□□□ 1.44
Trim16Q99PP9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Trim16Q99PP9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Trim16Q99PP9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
Trim16Q99PP9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Trim16Q99PP9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Trim16Q99PP9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Trim16Q99PP9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Trim16Q99PP9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Trim16Q99PP9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
Trim16Q99PP9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Trim16Q99PP9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC24■■□□□ 1.43
Trim16Q99PP9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
Trim16Q99PP9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Trim16Q99PP9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Trim16Q99PP9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Trim16Q99PP9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Trim16Q99PP9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Trim16Q99PP9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Trim16Q99PP9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Trim16Q99PP9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.97■■□□□ 1.43
Trim16Q99PP9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Trim16Q99PP9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Trim16Q99PP9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
Trim16Q99PP9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Trim16Q99PP9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Trim16Q99PP9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Trim16Q99PP9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Trim16Q99PP9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Trim16Q99PP9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Trim16Q99PP9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.42
Trim16Q99PP9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Trim16Q99PP9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trim16Q99PP9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Trim16Q99PP9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trim16Q99PP9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.93■■□□□ 1.42
Trim16Q99PP9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Trim16Q99PP9 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.92■■□□□ 1.42
Trim16Q99PP9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Trim16Q99PP9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Trim16Q99PP9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Trim16Q99PP9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Trim16Q99PP9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Trim16Q99PP9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trim16Q99PP9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trim16Q99PP9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trim16Q99PP9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Trim16Q99PP9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Trim16Q99PP9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.89■■□□□ 1.41
Trim16Q99PP9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Trim16Q99PP9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.88■■□□□ 1.41
Trim16Q99PP9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Trim16Q99PP9 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.87■■□□□ 1.41
Trim16Q99PP9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Trim16Q99PP9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Trim16Q99PP9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.85■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms