Protein–RNA interactions for Protein: Q91VA1

Slc44a4, Choline transporter-like protein 4, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a4Q91VA1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC30,95■■■□□ 2,55
Slc44a4Q91VA1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30,94■■■□□ 2,54
Slc44a4Q91VA1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC30,94■■■□□ 2,54
Slc44a4Q91VA1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30,94■■■□□ 2,54
Slc44a4Q91VA1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC30,93■■■□□ 2,54
Slc44a4Q91VA1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30,92■■■□□ 2,54
Slc44a4Q91VA1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC30,91■■■□□ 2,54
Slc44a4Q91VA1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC30,9■■■□□ 2,54
Slc44a4Q91VA1 Gm24970-201ENSMUST00000175582 82 ntBASIC30,9■■■□□ 2,54
Slc44a4Q91VA1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30,9■■■□□ 2,54
Slc44a4Q91VA1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC30,89■■■□□ 2,54
Slc44a4Q91VA1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC30,89■■■□□ 2,54
Slc44a4Q91VA1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC30,88■■■□□ 2,53
Slc44a4Q91VA1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC30,86■■■□□ 2,53
Slc44a4Q91VA1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC30,86■■■□□ 2,53
Slc44a4Q91VA1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC30,83■■■□□ 2,53
Slc44a4Q91VA1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC30,83■■■□□ 2,53
Slc44a4Q91VA1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC30,83■■■□□ 2,53
Slc44a4Q91VA1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30,82■■■□□ 2,52
Slc44a4Q91VA1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30,81■■■□□ 2,52
Slc44a4Q91VA1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC30,8■■■□□ 2,52
Slc44a4Q91VA1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30,79■■■□□ 2,52
Slc44a4Q91VA1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC30,78■■■□□ 2,52
Slc44a4Q91VA1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC30,74■■■□□ 2,51
Slc44a4Q91VA1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30,73■■■□□ 2,51
Slc44a4Q91VA1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC30,73■■■□□ 2,51
Slc44a4Q91VA1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC30,73■■■□□ 2,51
Slc44a4Q91VA1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30,71■■■□□ 2,51
Slc44a4Q91VA1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30,7■■■□□ 2,51
Slc44a4Q91VA1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC30,69■■■□□ 2,5
Slc44a4Q91VA1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC30,69■■■□□ 2,5
Slc44a4Q91VA1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC30,67■■■□□ 2,5
Slc44a4Q91VA1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30,67■■■□□ 2,5
Slc44a4Q91VA1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30,67■■■□□ 2,5
Slc44a4Q91VA1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC30,64■■■□□ 2,5
Slc44a4Q91VA1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC30,63■■■□□ 2,49
Slc44a4Q91VA1 Gm43863-201ENSMUST00000203822 1192 ntBASIC30,62■■■□□ 2,49
Slc44a4Q91VA1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30,62■■■□□ 2,49
Slc44a4Q91VA1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC30,62■■■□□ 2,49
Slc44a4Q91VA1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC30,61■■■□□ 2,49
Slc44a4Q91VA1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC30,61■■■□□ 2,49
Slc44a4Q91VA1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC30,61■■■□□ 2,49
Slc44a4Q91VA1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30,61■■■□□ 2,49
Slc44a4Q91VA1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC30,61■■■□□ 2,49
Slc44a4Q91VA1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30,58■■■□□ 2,49
Slc44a4Q91VA1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30,57■■■□□ 2,48
Slc44a4Q91VA1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC30,56■■■□□ 2,48
Slc44a4Q91VA1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC30,55■■■□□ 2,48
Slc44a4Q91VA1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC30,55■■■□□ 2,48
Slc44a4Q91VA1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC30,55■■■□□ 2,48
Slc44a4Q91VA1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30,55■■■□□ 2,48
Slc44a4Q91VA1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30,54■■■□□ 2,48
Slc44a4Q91VA1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC30,52■■■□□ 2,48
Slc44a4Q91VA1 Gm9939-201ENSMUST00000067161 1154 ntBASIC30,52■■■□□ 2,48
Slc44a4Q91VA1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC30,51■■■□□ 2,47
Slc44a4Q91VA1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30,51■■■□□ 2,47
Slc44a4Q91VA1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC30,5■■■□□ 2,47
Slc44a4Q91VA1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC30,48■■■□□ 2,47
Slc44a4Q91VA1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC30,48■■■□□ 2,47
Slc44a4Q91VA1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC30,47■■■□□ 2,47
Slc44a4Q91VA1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC30,47■■■□□ 2,47
Slc44a4Q91VA1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC30,47■■■□□ 2,47
Slc44a4Q91VA1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC30,46■■■□□ 2,47
Slc44a4Q91VA1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC30,46■■■□□ 2,47
Slc44a4Q91VA1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC30,46■■■□□ 2,47
Slc44a4Q91VA1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC30,45■■■□□ 2,46
Slc44a4Q91VA1 Gm2415-204ENSMUST00000190235 2004 ntBASIC30,44■■■□□ 2,46
Slc44a4Q91VA1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC30,44■■■□□ 2,46
Slc44a4Q91VA1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30,43■■■□□ 2,46
Slc44a4Q91VA1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC30,43■■■□□ 2,46
Slc44a4Q91VA1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC30,42■■■□□ 2,46
Slc44a4Q91VA1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC30,42■■■□□ 2,46
Slc44a4Q91VA1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC30,39■■■□□ 2,46
Slc44a4Q91VA1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30,38■■■□□ 2,45
Slc44a4Q91VA1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC30,38■■■□□ 2,45
Slc44a4Q91VA1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC30,37■■■□□ 2,45
Slc44a4Q91VA1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC30,37■■■□□ 2,45
Slc44a4Q91VA1 Gm8503-201ENSMUST00000118131 455 ntBASIC30,35■■■□□ 2,45
Slc44a4Q91VA1 AC157572.2-201ENSMUST00000226970 908 ntBASIC30,35■■■□□ 2,45
Slc44a4Q91VA1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30,35■■■□□ 2,45
Slc44a4Q91VA1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC30,34■■■□□ 2,45
Slc44a4Q91VA1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC30,33■■■□□ 2,45
Slc44a4Q91VA1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC30,33■■■□□ 2,45
Slc44a4Q91VA1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC30,32■■■□□ 2,44
Slc44a4Q91VA1 Gm5987-201ENSMUST00000196433 1151 ntBASIC30,31■■■□□ 2,44
Slc44a4Q91VA1 Gm30346-201ENSMUST00000218641 1699 ntBASIC30,3■■■□□ 2,44
Slc44a4Q91VA1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC30,3■■■□□ 2,44
Slc44a4Q91VA1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC30,29■■■□□ 2,44
Slc44a4Q91VA1 Gm6821-201ENSMUST00000107540 542 ntBASIC30,29■■■□□ 2,44
Slc44a4Q91VA1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30,29■■■□□ 2,44
Slc44a4Q91VA1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC30,28■■■□□ 2,44
Slc44a4Q91VA1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC30,27■■■□□ 2,44
Slc44a4Q91VA1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC30,27■■■□□ 2,44
Slc44a4Q91VA1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30,26■■■□□ 2,43
Slc44a4Q91VA1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC30,26■■■□□ 2,43
Slc44a4Q91VA1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC30,25■■■□□ 2,43
Slc44a4Q91VA1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC30,21■■■□□ 2,43
Slc44a4Q91VA1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC30,2■■■□□ 2,43
Slc44a4Q91VA1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30,19■■■□□ 2,42
Slc44a4Q91VA1 Gm6658-202ENSMUST00000209493 1885 ntBASIC30,16■■■□□ 2,42
Retrieved 100 of 76,532 protein–RNA pairs in 21,9 ms