Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Rpp40Q8R1F9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC27.63■■■□□ 2.01
Rpp40Q8R1F9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC27.63■■■□□ 2.01
Rpp40Q8R1F9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Rpp40Q8R1F9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Rpp40Q8R1F9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Rpp40Q8R1F9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Rpp40Q8R1F9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
Rpp40Q8R1F9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Rpp40Q8R1F9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.54■■■□□ 2
Rpp40Q8R1F9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Rpp40Q8R1F9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
Rpp40Q8R1F9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
Rpp40Q8R1F9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Rpp40Q8R1F9 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.47■■□□□ 1.99
Rpp40Q8R1F9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Rpp40Q8R1F9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Rpp40Q8R1F9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
Rpp40Q8R1F9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.98
Rpp40Q8R1F9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Rpp40Q8R1F9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Rpp40Q8R1F9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Rpp40Q8R1F9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Rpp40Q8R1F9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Rpp40Q8R1F9 Gm30346-201ENSMUST00000218641 1699 ntBASIC27.4■■□□□ 1.98
Rpp40Q8R1F9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Rpp40Q8R1F9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Rpp40Q8R1F9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Rpp40Q8R1F9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27.36■■□□□ 1.97
Rpp40Q8R1F9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Rpp40Q8R1F9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Rpp40Q8R1F9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
Rpp40Q8R1F9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Rpp40Q8R1F9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Rpp40Q8R1F9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Rpp40Q8R1F9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Rpp40Q8R1F9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Rpp40Q8R1F9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Rpp40Q8R1F9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Rpp40Q8R1F9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.29■■□□□ 1.96
Rpp40Q8R1F9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Rpp40Q8R1F9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Rpp40Q8R1F9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Rpp40Q8R1F9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC27.28■■□□□ 1.96
Rpp40Q8R1F9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC27.27■■□□□ 1.96
Rpp40Q8R1F9 Gm9397-201ENSMUST00000200125 605 ntBASIC27.27■■□□□ 1.96
Rpp40Q8R1F9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
Rpp40Q8R1F9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
Rpp40Q8R1F9 Gm45855-201ENSMUST00000212546 880 ntBASIC27.26■■□□□ 1.95
Rpp40Q8R1F9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Rpp40Q8R1F9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC27.24■■□□□ 1.95
Rpp40Q8R1F9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC27.24■■□□□ 1.95
Rpp40Q8R1F9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
Rpp40Q8R1F9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC27.24■■□□□ 1.95
Rpp40Q8R1F9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC27.23■■□□□ 1.95
Rpp40Q8R1F9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Rpp40Q8R1F9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC27.23■■□□□ 1.95
Rpp40Q8R1F9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Rpp40Q8R1F9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Rpp40Q8R1F9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
Rpp40Q8R1F9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
Rpp40Q8R1F9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Rpp40Q8R1F9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Rpp40Q8R1F9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC27.16■■□□□ 1.94
Rpp40Q8R1F9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Rpp40Q8R1F9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Rpp40Q8R1F9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Rpp40Q8R1F9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
Rpp40Q8R1F9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC27.14■■□□□ 1.94
Rpp40Q8R1F9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.93
Rpp40Q8R1F9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rpp40Q8R1F9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Rpp40Q8R1F9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Rpp40Q8R1F9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Rpp40Q8R1F9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Rpp40Q8R1F9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rpp40Q8R1F9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Rpp40Q8R1F9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rpp40Q8R1F9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
Rpp40Q8R1F9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Rpp40Q8R1F9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Rpp40Q8R1F9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC27.08■■□□□ 1.93
Rpp40Q8R1F9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Rpp40Q8R1F9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Rpp40Q8R1F9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Rpp40Q8R1F9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Rpp40Q8R1F9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Rpp40Q8R1F9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC27.05■■□□□ 1.92
Rpp40Q8R1F9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC27.05■■□□□ 1.92
Rpp40Q8R1F9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Rpp40Q8R1F9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
Rpp40Q8R1F9 Gm24970-201ENSMUST00000175582 82 ntBASIC27.03■■□□□ 1.92
Rpp40Q8R1F9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC27.03■■□□□ 1.92
Rpp40Q8R1F9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Rpp40Q8R1F9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Rpp40Q8R1F9 Gm6345-201ENSMUST00000180378 1691 ntBASIC27.01■■□□□ 1.92
Rpp40Q8R1F9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC27.01■■□□□ 1.91
Rpp40Q8R1F9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Rpp40Q8R1F9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Rpp40Q8R1F9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.98■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms