Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Hmgcs1Q8JZK9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.14■■□□□ 1.46
Hmgcs1Q8JZK9 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.14■■□□□ 1.46
Hmgcs1Q8JZK9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.13■■□□□ 1.45
Hmgcs1Q8JZK9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Hmgcs1Q8JZK9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.12■■□□□ 1.45
Hmgcs1Q8JZK9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.11■■□□□ 1.45
Hmgcs1Q8JZK9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.11■■□□□ 1.45
Hmgcs1Q8JZK9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Hmgcs1Q8JZK9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
Hmgcs1Q8JZK9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Hmgcs1Q8JZK9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Hmgcs1Q8JZK9 Peli2-204ENSMUST00000226513 1320 ntBASIC24.07■■□□□ 1.44
Hmgcs1Q8JZK9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Hmgcs1Q8JZK9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Hmgcs1Q8JZK9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Hmgcs1Q8JZK9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Hmgcs1Q8JZK9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Hmgcs1Q8JZK9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Hmgcs1Q8JZK9 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.03■■□□□ 1.44
Hmgcs1Q8JZK9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Hmgcs1Q8JZK9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Hmgcs1Q8JZK9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Hmgcs1Q8JZK9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24■■□□□ 1.43
Hmgcs1Q8JZK9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Hmgcs1Q8JZK9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Hmgcs1Q8JZK9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Hmgcs1Q8JZK9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Hmgcs1Q8JZK9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Hmgcs1Q8JZK9 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.97■■□□□ 1.43
Hmgcs1Q8JZK9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Hmgcs1Q8JZK9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Hmgcs1Q8JZK9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Hmgcs1Q8JZK9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Hmgcs1Q8JZK9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Hmgcs1Q8JZK9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Hmgcs1Q8JZK9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.95■■□□□ 1.42
Hmgcs1Q8JZK9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
Hmgcs1Q8JZK9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Hmgcs1Q8JZK9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Hmgcs1Q8JZK9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.93■■□□□ 1.42
Hmgcs1Q8JZK9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Hmgcs1Q8JZK9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Hmgcs1Q8JZK9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Hmgcs1Q8JZK9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Hmgcs1Q8JZK9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Hmgcs1Q8JZK9 Amer2-203ENSMUST00000225247 2662 ntBASIC23.9■■□□□ 1.42
Hmgcs1Q8JZK9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Hmgcs1Q8JZK9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Hmgcs1Q8JZK9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Hmgcs1Q8JZK9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.87■■□□□ 1.41
Hmgcs1Q8JZK9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Hmgcs1Q8JZK9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Hmgcs1Q8JZK9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Hmgcs1Q8JZK9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.84■■□□□ 1.41
Hmgcs1Q8JZK9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Hmgcs1Q8JZK9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Hmgcs1Q8JZK9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Hmgcs1Q8JZK9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Hmgcs1Q8JZK9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Hmgcs1Q8JZK9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.81■■□□□ 1.4
Hmgcs1Q8JZK9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Hmgcs1Q8JZK9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Hmgcs1Q8JZK9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hmgcs1Q8JZK9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Hmgcs1Q8JZK9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Hmgcs1Q8JZK9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hmgcs1Q8JZK9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Hmgcs1Q8JZK9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hmgcs1Q8JZK9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.77■■□□□ 1.4
Hmgcs1Q8JZK9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hmgcs1Q8JZK9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Hmgcs1Q8JZK9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Hmgcs1Q8JZK9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Hmgcs1Q8JZK9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Hmgcs1Q8JZK9 Gm24804-201ENSMUST00000174982 85 ntBASIC23.75■■□□□ 1.39
Hmgcs1Q8JZK9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Hmgcs1Q8JZK9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Hmgcs1Q8JZK9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.72■■□□□ 1.39
Hmgcs1Q8JZK9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Hmgcs1Q8JZK9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
Hmgcs1Q8JZK9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Hmgcs1Q8JZK9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Hmgcs1Q8JZK9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Hmgcs1Q8JZK9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Hmgcs1Q8JZK9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Hmgcs1Q8JZK9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Hmgcs1Q8JZK9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.68■■□□□ 1.38
Hmgcs1Q8JZK9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Hmgcs1Q8JZK9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Hmgcs1Q8JZK9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
Hmgcs1Q8JZK9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Hmgcs1Q8JZK9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Hmgcs1Q8JZK9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Hmgcs1Q8JZK9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Hmgcs1Q8JZK9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Hmgcs1Q8JZK9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Hmgcs1Q8JZK9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Hmgcs1Q8JZK9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Hmgcs1Q8JZK9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms