Protein–RNA interactions for Protein: Q8JZK6

Trim61, MCG22896, isoform CRA_b, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61Q8JZK6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC27■■□□□ 1.91
Trim61Q8JZK6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Trim61Q8JZK6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
Trim61Q8JZK6 Gm24970-201ENSMUST00000175582 82 ntBASIC26.98■■□□□ 1.91
Trim61Q8JZK6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Trim61Q8JZK6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Trim61Q8JZK6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.96■■□□□ 1.91
Trim61Q8JZK6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.96■■□□□ 1.91
Trim61Q8JZK6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.96■■□□□ 1.91
Trim61Q8JZK6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Trim61Q8JZK6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Trim61Q8JZK6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Trim61Q8JZK6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
Trim61Q8JZK6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Trim61Q8JZK6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
Trim61Q8JZK6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Trim61Q8JZK6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Trim61Q8JZK6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.91■■□□□ 1.9
Trim61Q8JZK6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.9■■□□□ 1.9
Trim61Q8JZK6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Trim61Q8JZK6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Trim61Q8JZK6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Trim61Q8JZK6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Trim61Q8JZK6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trim61Q8JZK6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
Trim61Q8JZK6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Trim61Q8JZK6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Trim61Q8JZK6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
Trim61Q8JZK6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Trim61Q8JZK6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.86■■□□□ 1.89
Trim61Q8JZK6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Trim61Q8JZK6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.84■■□□□ 1.89
Trim61Q8JZK6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Trim61Q8JZK6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.81■■□□□ 1.88
Trim61Q8JZK6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Trim61Q8JZK6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Trim61Q8JZK6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Trim61Q8JZK6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.79■■□□□ 1.88
Trim61Q8JZK6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Trim61Q8JZK6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.77■■□□□ 1.88
Trim61Q8JZK6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Trim61Q8JZK6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
Trim61Q8JZK6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
Trim61Q8JZK6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Trim61Q8JZK6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.72■■□□□ 1.87
Trim61Q8JZK6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
Trim61Q8JZK6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
Trim61Q8JZK6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim61Q8JZK6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim61Q8JZK6 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.68■■□□□ 1.86
Trim61Q8JZK6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Trim61Q8JZK6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.65■■□□□ 1.86
Trim61Q8JZK6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Trim61Q8JZK6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Trim61Q8JZK6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Trim61Q8JZK6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Trim61Q8JZK6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Trim61Q8JZK6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Trim61Q8JZK6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Trim61Q8JZK6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Trim61Q8JZK6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
Trim61Q8JZK6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Trim61Q8JZK6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.57■■□□□ 1.84
Trim61Q8JZK6 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.57■■□□□ 1.84
Trim61Q8JZK6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.57■■□□□ 1.84
Trim61Q8JZK6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Trim61Q8JZK6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Trim61Q8JZK6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Trim61Q8JZK6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC26.55■■□□□ 1.84
Trim61Q8JZK6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trim61Q8JZK6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Trim61Q8JZK6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Trim61Q8JZK6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Trim61Q8JZK6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
Trim61Q8JZK6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Trim61Q8JZK6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Trim61Q8JZK6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Trim61Q8JZK6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Trim61Q8JZK6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Trim61Q8JZK6 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.49■■□□□ 1.83
Trim61Q8JZK6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trim61Q8JZK6 Gm8503-201ENSMUST00000118131 455 ntBASIC26.47■■□□□ 1.83
Trim61Q8JZK6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Trim61Q8JZK6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trim61Q8JZK6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Trim61Q8JZK6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Trim61Q8JZK6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
Trim61Q8JZK6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC26.43■■□□□ 1.82
Trim61Q8JZK6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.43■■□□□ 1.82
Trim61Q8JZK6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.43■■□□□ 1.82
Trim61Q8JZK6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
Trim61Q8JZK6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
Trim61Q8JZK6 Gm6821-201ENSMUST00000107540 542 ntBASIC26.4■■□□□ 1.82
Trim61Q8JZK6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
Trim61Q8JZK6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Trim61Q8JZK6 Gm5987-201ENSMUST00000196433 1151 ntBASIC26.39■■□□□ 1.82
Trim61Q8JZK6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Trim61Q8JZK6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Trim61Q8JZK6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Trim61Q8JZK6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC26.38■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms