Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ShfQ8CG80 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.68■■□□□ 1.22
ShfQ8CG80 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.67■■□□□ 1.22
ShfQ8CG80 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
ShfQ8CG80 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
ShfQ8CG80 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ShfQ8CG80 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.65■■□□□ 1.22
ShfQ8CG80 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ShfQ8CG80 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
ShfQ8CG80 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ShfQ8CG80 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ShfQ8CG80 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ShfQ8CG80 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ShfQ8CG80 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ShfQ8CG80 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ShfQ8CG80 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ShfQ8CG80 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC22.62■■□□□ 1.21
ShfQ8CG80 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ShfQ8CG80 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.62■■□□□ 1.21
ShfQ8CG80 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ShfQ8CG80 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ShfQ8CG80 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ShfQ8CG80 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
ShfQ8CG80 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ShfQ8CG80 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
ShfQ8CG80 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
ShfQ8CG80 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.58■■□□□ 1.2
ShfQ8CG80 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ShfQ8CG80 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ShfQ8CG80 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ShfQ8CG80 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
ShfQ8CG80 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ShfQ8CG80 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.53■■□□□ 1.2
ShfQ8CG80 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ShfQ8CG80 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
ShfQ8CG80 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ShfQ8CG80 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ShfQ8CG80 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ShfQ8CG80 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ShfQ8CG80 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ShfQ8CG80 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.48■■□□□ 1.19
ShfQ8CG80 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
ShfQ8CG80 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
ShfQ8CG80 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ShfQ8CG80 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ShfQ8CG80 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
ShfQ8CG80 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ShfQ8CG80 Amer2-203ENSMUST00000225247 2662 ntBASIC22.44■■□□□ 1.18
ShfQ8CG80 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
ShfQ8CG80 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ShfQ8CG80 Peli2-204ENSMUST00000226513 1320 ntBASIC22.43■■□□□ 1.18
ShfQ8CG80 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ShfQ8CG80 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.42■■□□□ 1.18
ShfQ8CG80 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ShfQ8CG80 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ShfQ8CG80 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.41■■□□□ 1.18
ShfQ8CG80 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ShfQ8CG80 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.4■■□□□ 1.18
ShfQ8CG80 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.4■■□□□ 1.18
ShfQ8CG80 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ShfQ8CG80 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
ShfQ8CG80 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ShfQ8CG80 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ShfQ8CG80 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ShfQ8CG80 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ShfQ8CG80 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ShfQ8CG80 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ShfQ8CG80 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ShfQ8CG80 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ShfQ8CG80 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
ShfQ8CG80 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ShfQ8CG80 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ShfQ8CG80 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.35■■□□□ 1.17
ShfQ8CG80 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ShfQ8CG80 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
ShfQ8CG80 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ShfQ8CG80 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
ShfQ8CG80 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.33■■□□□ 1.17
ShfQ8CG80 Gm26115-201ENSMUST00000175605 87 ntBASIC22.32■■□□□ 1.16
ShfQ8CG80 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
ShfQ8CG80 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ShfQ8CG80 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ShfQ8CG80 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.3■■□□□ 1.16
ShfQ8CG80 Gm8109-201ENSMUST00000194076 746 ntBASIC22.3■■□□□ 1.16
ShfQ8CG80 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ShfQ8CG80 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
ShfQ8CG80 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ShfQ8CG80 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ShfQ8CG80 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ShfQ8CG80 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
ShfQ8CG80 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ShfQ8CG80 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ShfQ8CG80 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.23■■□□□ 1.15
ShfQ8CG80 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ShfQ8CG80 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
ShfQ8CG80 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ShfQ8CG80 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
ShfQ8CG80 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ShfQ8CG80 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ShfQ8CG80 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms